9 homologs were found in PanDaTox collection
for query gene Pmen_4163 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_4163  hypothetical protein  100 
 
 		 177 aa  348  3e-95  Pseudomonas mendocina ymp  Bacteria  normal  0.962185  normal  1 
 
 
-
 
NC_009439  Pmen_2926  hypothetical protein  43.38 
 
 		 213 aa  99.4  2e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.657336  normal  0.332797 
 
 
-
 
NC_008463  PA14_23980  secretion protein XcpP  40.4 
 
 		 235 aa  86.3  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_2029  secretion protein XcpP  40.15 
 
 		 218 aa  85.9  3e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008048  Sala_0314  type II secretion system protein C  36.15 
 
 		 288 aa  52  0.000005  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.914338 
 
 
-
 
NC_008463  PA14_40330  hypothetical protein  38.97 
 
 		 175 aa  44.3  0.0008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0677929  normal  1 
 
 
-
 
NC_007651  BTH_I0010  GspC  36.92 
 
 		 136 aa  41.6  0.006  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1042  type II secretion protein C  36.73 
 
 		 141 aa  41.6  0.007  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_4181  type II secretion protein C  34.69 
 
 		 141 aa  41.2  0.008  Pseudomonas putida W619  Bacteria  normal  0.963032  normal  1 
 
 
-
 
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