Gene Pmen_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4163 
Symbol 
ID5105682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4568048 
End bp4568581 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content73% 
IMG OID640505427 
Producthypothetical protein 
Protein accessionYP_001189642 
Protein GI146309177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.962185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCG CCAACTCCGG CGCAGTGCGC CACCTGCCGG CCGGCCTCTG CCTGCTGGCA 
CTCCTGGCCT GCAGCCTCAG CCTGAGCTAC CAGGCCGCGC AGCTGTGGCG GTTGCTGCAG
GAACCGCCCG CCTACACCCA GGCGCCACCG CCAACGCCGC CGCGCGTGGC GGATCGGCAA
CGGCTGGCCA TGCTGTTTCC CGCCCCGCTG CCCGGTCATG CCGGCCCCGC GCCGGCCACT
TCCCTGCAGC TGACCCTGGT CGCCGTGTTC GGCAACCCCG AGCAGCAGCG CTCCAGCGCC
ATCATCCGCC CGCACGGGCA GACCGCGCGG CGCGTTGCGG TCGGCGCCGA GATTGCGCCC
GGCATCAAGC TGCACAGCGT CGGCTCGCAC TACATCACCC TCGACCGCCA CGGCCGTCGG
GAGAGTCTGC ATTTTCCGGT GAACAACCAT CGGCCGCTGA TGCCCGCCGC AGACGCACGC
GGCCAGGCGC TGGCGCCGCA GCCTGAGCCC GTGACAAGCC TGGCGGGCCG TTGA
 
Protein sequence
MAPANSGAVR HLPAGLCLLA LLACSLSLSY QAAQLWRLLQ EPPAYTQAPP PTPPRVADRQ 
RLAMLFPAPL PGHAGPAPAT SLQLTLVAVF GNPEQQRSSA IIRPHGQTAR RVAVGAEIAP
GIKLHSVGSH YITLDRHGRR ESLHFPVNNH RPLMPAADAR GQALAPQPEP VTSLAGR