Gene PA14_23980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23980 
SymbolxcpP 
ID4381104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2083941 
End bp2084648 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID639324487 
Productsecretion protein XcpP 
Protein accessionYP_790069 
Protein GI116051100 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTC GGCGATCTTC AGACATAACG ATAAAGACCA GGAGTGATGT ATTGCCTTTC 
TCCGGCGCCT CTTCCCGCTG GCTGCAGCGG TACGCCCCGG CCCTTCTGGC TGTTGCCCTG
ATCATCGCCA TGAGCATCAG CCTCGCCTGG CAGGCGGCCG GCTGGTTGCG CCTGCAACGC
AGCCCGGTAG CCGTCGCCGC CTCGCCGGTC AGCCACGAGT CGATCCGCAG CGATCCGACC
CGCCTGGCGC GCCTCTTCGG CACCAGCGCC CAGGACCCCA ACGCCCCGCC ACCGGCCACC
AACCTCGACC TGGTGCTCAA GGGCAGCTTC GTCCAGAGCG ATCCCAAGCT GTCCAGCGCG
ATCATCCAGC GCCAGGGCGA CAAGCCGCAC CGCTACGCGG TCGGCGGCGA GATCAGCGAC
GGCGTGAAGC TGCACGCGGT CTACCGCGAC CGCGTCGAAC TGCAGCGCGG CGGGCGCCTG
GAAAGCCTGC CCTTCCCGCA CCGTTCCGGG GGACTGCTGG CCAGCGCGGA CGACATTACA
AGCGAGAACG ACTCGATCGA ACAACTGCAA AGCCTGCAGG ATGAGAACGC TGCAGCATTG
CGCGAGCGCC TGGACGCCTT GCGCCAGCAG ATGGAAGCCA CGCCCATCGC AGAACCCGCC
GAAGAAGACT CGAGCGAGCC CACGACCACG CCTACGGAAA GCGACTGA
 
Protein sequence
MIPRRSSDIT IKTRSDVLPF SGASSRWLQR YAPALLAVAL IIAMSISLAW QAAGWLRLQR 
SPVAVAASPV SHESIRSDPT RLARLFGTSA QDPNAPPPAT NLDLVLKGSF VQSDPKLSSA
IIQRQGDKPH RYAVGGEISD GVKLHAVYRD RVELQRGGRL ESLPFPHRSG GLLASADDIT
SENDSIEQLQ SLQDENAAAL RERLDALRQQ MEATPIAEPA EEDSSEPTTT PTESD