Gene PputGB1_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1042 
Symbol 
ID5868802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1190166 
End bp1190591 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID641546143 
Producttype II secretion protein C 
Protein accessionYP_001667288 
Protein GI167032057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCG CCTCGCGCGT GTTCACGGGC GCTGGCCTGA CCTTGGCCGG CTGGCTCGCT 
GCACAGTGTG TGCTGCAACT GAGCCGTCAG CCGCAACCCG CCACGGCGCC TGCGGCGGTC
GACAGCCCGC TGCCCGGGCT GATGGTTGGC CACTGGCAAG CGCCCATCGA CGACGGTGCC
ATTGCCCTTA CTCGCTTGCC ACTGCAATAC CTCGGCGGCC TCAAGGCGCA GCCATTGGCA
TCCAGTGTGG TGGTGCTGCG CTACGGCGAG CAAGTACGCA CTCTAGCCCG TGGCCAGCGC
CTGGCACCTG GGATCGTGCT GCAGGACATC GACAGCGATG GCCTGATTTT CAACAACCAG
GGGCGGCGCG AACGCCTGCC CTGGCCGCCA CGCCCTGCCG TGACCGGCTT CAAGCGGCAA
GGATGA
 
Protein sequence
MTLASRVFTG AGLTLAGWLA AQCVLQLSRQ PQPATAPAAV DSPLPGLMVG HWQAPIDDGA 
IALTRLPLQY LGGLKAQPLA SSVVVLRYGE QVRTLARGQR LAPGIVLQDI DSDGLIFNNQ
GRRERLPWPP RPAVTGFKRQ G