Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1042 |
Symbol | |
ID | 5868802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1190166 |
End bp | 1190591 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641546143 |
Product | type II secretion protein C |
Protein accession | YP_001667288 |
Protein GI | 167032057 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTCG CCTCGCGCGT GTTCACGGGC GCTGGCCTGA CCTTGGCCGG CTGGCTCGCT GCACAGTGTG TGCTGCAACT GAGCCGTCAG CCGCAACCCG CCACGGCGCC TGCGGCGGTC GACAGCCCGC TGCCCGGGCT GATGGTTGGC CACTGGCAAG CGCCCATCGA CGACGGTGCC ATTGCCCTTA CTCGCTTGCC ACTGCAATAC CTCGGCGGCC TCAAGGCGCA GCCATTGGCA TCCAGTGTGG TGGTGCTGCG CTACGGCGAG CAAGTACGCA CTCTAGCCCG TGGCCAGCGC CTGGCACCTG GGATCGTGCT GCAGGACATC GACAGCGATG GCCTGATTTT CAACAACCAG GGGCGGCGCG AACGCCTGCC CTGGCCGCCA CGCCCTGCCG TGACCGGCTT CAAGCGGCAA GGATGA
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Protein sequence | MTLASRVFTG AGLTLAGWLA AQCVLQLSRQ PQPATAPAAV DSPLPGLMVG HWQAPIDDGA IALTRLPLQY LGGLKAQPLA SSVVVLRYGE QVRTLARGQR LAPGIVLQDI DSDGLIFNNQ GRRERLPWPP RPAVTGFKRQ G
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