10 homologs were found in PanDaTox collection
for query gene Pmen_3982 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_3982  helix-turn-helix domain-containing protein  100 
 
 		 75 aa  152  2e-36  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00000105146  normal  0.107406 
 
 
-
 
NC_010465  YPK_1211  XRE family transcriptional regulator  56.06 
 
 		 71 aa  85.9  2e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_1405  hypothetical protein  44.62 
 
 		 68 aa  63.5  0.0000000009  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.00110719  n/a   
 
 
-
 
NC_004347  SO_2989  prophage LambdaSo, Cro/CI family transcriptional regulator  42.25 
 
 		 88 aa  61.6  0.000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01955  hypothetical protein  40 
 
 		 88 aa  56.2  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1971  XRE family transcriptional regulator  36.23 
 
 		 105 aa  52  0.000003  Shewanella baltica OS195  Bacteria  normal  0.0320655  normal  0.0438636 
 
 
-
 
NC_009665  Shew185_1854  XRE family transcriptional regulator  41.82 
 
 		 96 aa  50.8  0.000007  Shewanella baltica OS185  Bacteria  normal  0.0214862  n/a   
 
 
-
 
NC_009997  Sbal195_3398  XRE family transcriptional regulator  41.82 
 
 		 96 aa  50.8  0.000007  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.000830683 
 
 
-
 
NC_006368  lpp2375  hypothetical protein  39.62 
 
 		 220 aa  40.8  0.007  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013926  Aboo_0718  transcriptional regulator, XRE family  46.67 
 
 		 224 aa  40.4  0.007  Aciduliprofundum boonei T469  Archaea  normal  0.439384  n/a   
 
 
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