| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3982 |
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| Symbol | |
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| ID | 5110205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4360989 |
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| End bp | 4361216 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505245 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001189461 |
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| Protein GI | 146308996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000105146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.107406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCGTA TCGCCGCTGC CCGCGAAGAG GCGGGCATCA AGCAGCGCGA CCTCATCAAG
AAGCTGGGTT GGACGCAGGC TCGGGTCAGC AACTATGAGT CGGGCCGGCG CGTGCCTGGT
CTGGCTGAGT CCCGCGCCAT CGTCTCTGCG CTCAACGCGC TCGGCTCTCA GTGCACCCTT
GATGACGTTT TCCCGCCTGA GCTCGATGAG GCTCTGGCTG CTGCATAG
|
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| Protein sequence | MNRIAAAREE AGIKQRDLIK KLGWTQARVS NYESGRRVPG LAESRAIVSA LNALGSQCTL
DDVFPPELDE ALAAA
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