Gene Aboo_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0718 
Symbol 
ID8827664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand+ 
Start bp681599 
End bp682273 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content42% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003483091 
Protein GI289596395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.439384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTC GAGAGAAGAT AGCAGGGGAA ATAGTTTTAT CTTCCAAACC CGGGGCTACT 
ATGAGAAAGT GGAGGGAGAT GTTTGGGATA TCTCAGCAAG AGTTGGCAAG ATATCTTGGG 
ATGTCTTCAT CTGTTATAAG CGATTATGAA AGTGGCAGGA GAAAATCTCC TGGAGTTGGG 
ACAGTTAGAA AATTTGTCAA TGCCCTCATA GAAATAGATG AAGCCAAGGG TGGGGAGAAG 
GTGAAACAGC TATCATCCAC TTATGGGGAG GAAGCCATTT TGGATATGGG GGAGTTTCCT 
TACCAAATAA GCGTGGAGGA TTTTATGGAT TTGATTGATG CTAAGATAAC AAATGAGGGA 
GAGTTTAAAA GACAGATTTA CGGTTATACG ATTTTAGATA GTTTAAAGGC AATACTCCAT 
TACAGCTCCT TTGACTATTT GAGAGTTTAT GGATGGAGCA TCGATAGGGC GTTGATATTT 
ACGGGAGTGT ATTATGGGCG CTCTCCCATG GTGGCCATTC GAGCTCATCC TCTGAAACCC 
AGTGCGGTTG TTTATGTCTC TCCTCGCAAG GTTGATGAGC TTGCTATAAA ACTTGCAACT 
ATTGAAGATA TCCCTCTTGC AGTTACTGAG CTCGATGTTA AAGAGATAAA GAAGAGGCTT 
AGGGAAATAG GCTGA
 
Protein sequence
MELREKIAGE IVLSSKPGAT MRKWREMFGI SQQELARYLG MSSSVISDYE SGRRKSPGVG 
TVRKFVNALI EIDEAKGGEK VKQLSSTYGE EAILDMGEFP YQISVEDFMD LIDAKITNEG 
EFKRQIYGYT ILDSLKAILH YSSFDYLRVY GWSIDRALIF TGVYYGRSPM VAIRAHPLKP 
SAVVYVSPRK VDELAIKLAT IEDIPLAVTE LDVKEIKKRL REIG