9 homologs were found in PanDaTox collection
for query gene Pfl01_2411 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_2411  hypothetical protein  100 
 
 
88 aa  181  3e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00798695 
 
 
-
 
NC_008463  PA14_10020  hypothetical protein  64.77 
 
 
108 aa  120  4e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0027281  normal 
 
 
-
 
NC_011662  Tmz1t_2479  AIG2 family protein  52.33 
 
 
118 aa  88.6  3e-17  Thauera sp. MZ1T  Bacteria  normal  0.991817  n/a   
 
 
-
 
NC_009441  Fjoh_2005  hypothetical protein  38.89 
 
 
116 aa  75.1  0.0000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.842355  n/a   
 
 
-
 
NC_012917  PC1_1467  AIG2 family protein  42.05 
 
 
111 aa  73.2  0.000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.394219  n/a   
 
 
-
 
NC_013730  Slin_3246  AIG2 family protein  37.93 
 
 
122 aa  67  0.00000000009  Spirosoma linguale DSM 74  Bacteria  normal  0.0705888  normal 
 
 
-
 
NC_011004  Rpal_1478  AIG2 family protein  39.29 
 
 
135 aa  48.1  0.00004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4134  hypothetical protein  35.29 
 
 
132 aa  47.4  0.00006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3977  hypothetical protein  31.76 
 
 
135 aa  44.7  0.0004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.814433  normal 
 
 
-
 
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