Gene Rpal_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1478 
Symbol 
ID6409135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1558807 
End bp1559214 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID642711377 
ProductAIG2 family protein 
Protein accessionYP_001990493 
Protein GI192289888 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCCG ATCGTCTGTT CGTTTATGGC ACGCTGATGC GCGGCTACGA CCATCCGATG 
GCCCGGCTGC TGTCGTCGAA TGCCGAGTTT GTTGGGGCGG CTTCGATCCC GGGCCGGCTG
TATCTGGTGC GGCACTATCC GGGCCTGGTG CCGTCGGATG ATCCGGCCGA TCGCGTTCAC
GGCGAAGTGT TCCGGCTGCA TCGACCGGAC GAGGTGCTGG CGCAGCTCGA CGACTACGAA
GGGTGCGAGC CCCGCGACCA GCGCGCCGAG TACCGGCGCG AGATCGCCTG CGTGACGCTG
GAGGGCGGCA CCGAGCTCGA CGCGTTCGTG TACTATTTCA ATTGGGACGT GGCGCGGCTG
CCGCGCATTG CAACGGGGCG GTTTCAGCCG GAAGCGTTTT CCGGCTGA
 
Protein sequence
MMSDRLFVYG TLMRGYDHPM ARLLSSNAEF VGAASIPGRL YLVRHYPGLV PSDDPADRVH 
GEVFRLHRPD EVLAQLDDYE GCEPRDQRAE YRREIACVTL EGGTELDAFV YYFNWDVARL
PRIATGRFQP EAFSG