Gene RPD_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3977 
Symbol 
ID4024494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4425827 
End bp4426234 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID637964180 
Producthypothetical protein 
Protein accessionYP_571097 
Protein GI91978438 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.814433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC GCCTGTTCGT CTACGGCACG CTGATGCGCG GCTTCGACAA TCCGATGGCG 
CGGCTGCTGT CGTCCGACGC GGACTATCTC GGCCCGGCGA CGATGCCCGG CCGGCTCTAT
CGGGTGCGGC ACTATCCGGG GCTGATCGCA GCCGATGATC CGGCCGACAT CGTGTTCGGC
GAATTGTTCA GGCTGCGCCG GCCGCACGAA GTTCTCCCGC GGCTCGACGA CTACGAAGGC
TGCGGCGAAG GCGTCGCCGA GCCTGCGCAG TACCGGCGCG AGGTGGCGCG CGTCACGCTG
CAGGACGGCG GGGCGGTCGA GGCCTTCGTC TATATCTACA ACTGGCCGGT CGCGGGAAAG
CCGCGCATCG TCTCCGGCCG CTTTCAGCCG GAGGATTCAA CCGGCTGA
 
Protein sequence
MLDRLFVYGT LMRGFDNPMA RLLSSDADYL GPATMPGRLY RVRHYPGLIA ADDPADIVFG 
ELFRLRRPHE VLPRLDDYEG CGEGVAEPAQ YRREVARVTL QDGGAVEAFV YIYNWPVAGK
PRIVSGRFQP EDSTG