16 homologs were found in PanDaTox collection
for query gene Pden_1606 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_1606  methyltransferase type 12  100 
 
 
278 aa  584  1e-166  Paracoccus denitrificans PD1222  Bacteria  normal  0.278757  normal  0.301135 
 
 
-
 
NC_009523  RoseRS_0473  methyltransferase type 12  40.17 
 
 
277 aa  197  2.0000000000000003e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.0289469  normal  0.0160825 
 
 
-
 
NC_008740  Maqu_2638  methyltransferase type 12  37.32 
 
 
230 aa  145  8.000000000000001e-34  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00142392  n/a   
 
 
-
 
NC_010627  Bphy_7790  methyltransferase type 12  31.29 
 
 
174 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0190194  normal 
 
 
-
 
NC_014210  Ndas_3717  Methyltransferase type 12  30.71 
 
 
261 aa  92  8e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2928  hypothetical protein  30.48 
 
 
224 aa  87.4  2e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.0263693  n/a   
 
 
-
 
NC_013595  Sros_6182  hypothetical protein  32.81 
 
 
299 aa  87  3e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.011056  normal 
 
 
-
 
NC_013510  Tcur_1719  Methyltransferase type 12  30.85 
 
 
262 aa  78.6  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.269936  n/a   
 
 
-
 
NC_014165  Tbis_0432  type 12 methyltransferase  29.02 
 
 
337 aa  72.8  0.000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.418019  normal 
 
 
-
 
NC_010505  Mrad2831_4122  methyltransferase type 11  28.68 
 
 
231 aa  51.6  0.00002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4709  methyltransferase type 11  26.01 
 
 
281 aa  45.4  0.001  Sinorhizobium medicae WSM419  Bacteria  normal  0.34266  normal  0.333483 
 
 
-
 
NC_008312  Tery_1490  methyltransferase type 11  27.91 
 
 
211 aa  44.3  0.002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0869674  normal  0.806662 
 
 
-
 
NC_011757  Mchl_4233  Methyltransferase type 11  23.81 
 
 
293 aa  43.1  0.005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.102718  normal  0.351473 
 
 
-
 
NC_011071  Smal_1247  Methyltransferase type 12  25.45 
 
 
196 aa  42.7  0.007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.172462 
 
 
-
 
BN001304  ANIA_07146  sterol 24-c-methyltransferase, putative (AFU_orthologue; AFUA_4G03630)  26.01 
 
 
377 aa  42.4  0.01  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.690937  normal 
 
 
-
 
NC_009379  Pnuc_0321  methyltransferase type 11  25.71 
 
 
277 aa  42.4  0.01  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.514617  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>