Gene Pden_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1606 
Symbol 
ID4580213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1587959 
End bp1588795 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID639768923 
Productmethyltransferase type 12 
Protein accessionYP_915402 
Protein GI119384346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.278757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.301135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTG CACAGGTAGC CGCACCCCCT GACACTATCC CTTTCTCAAG GAGGAAACGG 
GTGGACAATA TTGCCTTGTC GGAAAAGGAA GACCTCCACA ACCAGTTCGG AGAAACCGAG
GAAATCGGCG GCAACCATTA TCGCGCCTAT GTCGGGCCGC CGAACTACTA CGACCTGATC
GGGGCGACGC AGTTCTATCT GCTGACGCTT TTCGGCATGC GCGAGACATC GAGCCTGCTG
GACATCGGCT GCGGCTCGTT GCGCGGCGGG CGTTTCGCCA TCATGTATCT GCGGCCCGGC
CGCTATTACG GCATCGACCC CGAGGAATGG GCCATCAGGG ACGGGCTGAA AAGCCATTTC
AACGAAGAAC TCGTCCAGCG CCGCAAGCCG AATTTCGTCA TCGACGGCGA TTTCGCCTTC
ACGAAATTCG GCCGCAAGTT CGACCTGATG ATGGCCCATT CGATCTTTAC CCATGCGCCG
CAATGGCAGA TCGCCAAATG CATGGCCGAG GCGAAAAAGG TCATGGTGCC CCAGACGGTG
TTCCTGGCCA CTTTCTTCGA GACGCTGGAC GGCAGCGATT ACCAGGGCGA CGCCTGGCTG
TATCCCGATA TCGTGCGCTA TCGCAGGGAA ACCATCGCGC AGATCGTCCA TGAGGCGGGG
CTGGAATGCC ACCATGTCGA ATGGCCGCAT CCCTTCAACC AGAAATGGAT CGCCGTGACC
CTGCCCGGCG CCGGGCTGGA TGTCGCCCGC GCGCTGTCCG GCCAGATCTA TTCCTACGAG
GCGACGCTGG AGCGTCGTCG GACCGACACG ACCTGGCCCG GCTCGGCCAC GAACTGA
 
Protein sequence
MQPAQVAAPP DTIPFSRRKR VDNIALSEKE DLHNQFGETE EIGGNHYRAY VGPPNYYDLI 
GATQFYLLTL FGMRETSSLL DIGCGSLRGG RFAIMYLRPG RYYGIDPEEW AIRDGLKSHF
NEELVQRRKP NFVIDGDFAF TKFGRKFDLM MAHSIFTHAP QWQIAKCMAE AKKVMVPQTV
FLATFFETLD GSDYQGDAWL YPDIVRYRRE TIAQIVHEAG LECHHVEWPH PFNQKWIAVT
LPGAGLDVAR ALSGQIYSYE ATLERRRTDT TWPGSATN