Gene Smed_4709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4709 
Symbol 
ID5318859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1227057 
End bp1227902 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID640776507 
Productmethyltransferase type 11 
Protein accessionYP_001313439 
Protein GI150376843 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.34266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.333483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CTGCACTACG CCAGGAAAAC ACGCATGCAA CGGACCTGCC CGCGCGGGAC 
GAGCGCGTGG AGACCCTGCT GGGAAGCATT CTTCGAAACC GCTTTCTGCC CGAACCCAAC
CCCGACAGCG TCTTTGTGGG CGACGGGGAT TTCAGGGCGG TGGGCGTCGA ATTCCTCGGC
CACTTCATCC GTCTGGCAGG GTTACGACCG GAAAGCCGCG TTCTCGATAT CGGTTGCGGC
ATCGGTCGAA TGGCCGTCCC GCTCACCCAG TATCTGGATT TCGAAAAGGG ACGCTACAGC
GGAATAGACC CGGTTGAAGG CGGCATAGCC TGGTGCCGTC GCTTCATCAC TCCGGCCTAT
CAGAATTTCG CGTTCCAGCG AGTCGATATC GCCCATGAGC TTTATAATCC GAGCGGCAAG
ATCAGCGGCA ATGCGCTGAA ACTGCCCTAC GCCGACGGTC ACTTCGACTT CGTTATCATG
ACATCCATCG TGACCCATCT GCCGCCGGAC GAAGTGCTCG TCTATCTGCG CGAAGTTGGA
AGGCTGCTGA AGCCGGGGGG CCGCCTCTTC ATGACGGCCT TCGTGGTCGA TGACGTTGCG
GCTGCGAACG AAAGCGGCCG ACGCGATGCA CGCCTTTCCT TCGCACGCGA TGGCGAGGGA
CCATGCTGGT ACGTTCCCGA GATGCCGCGT CTTGCCGCGG TGGGTTTCGA CGAAGGCTTT
CTTGACGGCG CACTCGAGCG TGCCGGCCTC AAAATCAACC TGAAGTCGCT CGGTGCCTGG
CGTGGGGTTT CGGCGGAGCA CTATCAGGAC ATTTTCGTCG CCGAACGCCG GGGGAGCGGC
CCGTGA
 
Protein sequence
MTETALRQEN THATDLPARD ERVETLLGSI LRNRFLPEPN PDSVFVGDGD FRAVGVEFLG 
HFIRLAGLRP ESRVLDIGCG IGRMAVPLTQ YLDFEKGRYS GIDPVEGGIA WCRRFITPAY
QNFAFQRVDI AHELYNPSGK ISGNALKLPY ADGHFDFVIM TSIVTHLPPD EVLVYLREVG
RLLKPGGRLF MTAFVVDDVA AANESGRRDA RLSFARDGEG PCWYVPEMPR LAAVGFDEGF
LDGALERAGL KINLKSLGAW RGVSAEHYQD IFVAERRGSG P