9 homologs were found in PanDaTox collection
for query gene Pden_0460 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008686  Pden_0460  hypothetical protein  100 
 
 
493 aa  1001    Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2536  hypothetical protein  29.96 
 
 
617 aa  89.7  1e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3201  hypothetical protein  22.82 
 
 
610 aa  85.9  0.000000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2090  hypothetical protein  28.65 
 
 
618 aa  84  0.000000000000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0731  hypothetical protein  23.44 
 
 
525 aa  67  0.0000000007  Brucella suis 1330  Bacteria  normal  0.0530623  n/a   
 
 
-
 
NC_012850  Rleg_1517  hypothetical protein  22.25 
 
 
613 aa  65.9  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.675511  normal  0.340737 
 
 
-
 
NC_009636  Smed_1190  hypothetical protein  23.79 
 
 
612 aa  65.1  0.000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.204201  normal  0.1151 
 
 
-
 
NC_010505  Mrad2831_4754  hypothetical protein  22.36 
 
 
609 aa  60.1  0.00000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0028  hypothetical protein  23.47 
 
 
632 aa  43.5  0.009  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
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