| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1190 |
|---|
| Symbol | |
|---|
| ID | 5322037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1270069 |
|---|
| End bp | 1271907 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640790131 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001326875 |
|---|
| Protein GI | 150396408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.204201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.1151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGTC TCACGATCAA AGTCCCGTTC CACGATGGCG AGGCAACCAG CGGATATGCA
TCGCGGCTCG CCGCTGCCAA CGGAGTTGAC GGATCCGACT TCGGCGCGCT CATGGAAATC
GGGTGGCTTC CACTTTTATA CGGAAAGGAG GATGCTTTGT TCCGCCTCTC CAGTGTCTGC
GGTATCGATG TGAGCACGCT GTCACGCGGC TTCGTCCGCC CCGACTCTTC CGGCACGGCA
GCGGCCGTCC AGATTAACGG AGAGCAGCTA ACTAAGGCTC AGGTGCTGCG ATGGGATCCC
CGCTACTGCC CCCAATGCGT CCGGGAGGAC ATCGCCACGA GTACAGGCGC GGTCGAAGCG
AGGCCCTATC AGAGGCTGGA CTCGCTGGTG ACGTTCATCC GCACCTGCGA GGCGCATGAC
GTCATGTTGC GGCGGGCCGA GCCAGTCGTT GAATATCGTC ACCGTAGAGA TTTCGCTAGG
CGGATCAAGT TCGAGATCAT TGAGGGGCAT CTCGACGCCG CCCCTGTCGT CAAGCGTCAC
ACTGCATTCG AGCGATACAT CGCGTCCCGC CTCCATGGGC GTGTAACCGA TACGCCTTGG
ATGGACGGAA TGCCGCTGCA CGTGGTGGGG AGGATGTGCG AGGTCGTCGG CGGTGCGGAG
CTCTTCGGGT TCGACTTCAA GTTCCGGGCG CTCAGCGAAG AGGACTGGGT TGATGCCGCC
GCTCGCGGTT TCGAAATCAT GTCACGGGGA GAAGTCGGCT TCGTTGAGTT TCTCTATTCG
CTTCACGGAA ACTTCTGGAA GTCGAGCGCC GACTTCGGTG GGAGGTCGGT ATACGGCACA
CTCTACGTCT ATCTGCAGGC AAATCCCGAT CCTGGCTATG ACAGCATCAG GAACATCATG
AAAGATATCG CCCTTGATAA CTTCCCGCTC GGTCCCGGCG ATGATTTTTT TGGGACGGTG
ACATGCAGGA GGGTGCACTC CGTAAGAACG GGGTCGCTGA TCAGCCGTTT CGCCGACAGG
ACATTGCACA AGCTGTTGAT CGCAGCCGGT CTGGTTGATC CCGCAACCAA AGGGACGAAC
CCGAACAAGG TCCTTATCAA TGGAGATCGC ATGGAGACCT TCATCCGTGG AGCGGATGAT
CTCCTTGTTG GTCCTGCTGC TCGGGAATAT CTTGGCATCT CGTTGAGTAC GTGGAAGAGC
CTTCTAGCGG ACGGCTTTAT CCAGCCTTGC ATTCGAAGCG CCAGTGGTGA GAATGTAAAG
TCGCTGTTCC GTCGGTCCGA CCTTGATGAT TTCGCTTCGA AGCTGGAGGC ACAGGTCACG
GCGCCACTCG CCAGCCGCAC TAGCTTCATC TCGCTTCCAA CTGCGGCCAG TCGCGTCCAC
AGGCCGATCA CGGAAGTGTT GAACTTCCTA CTCGCGGGAA AGCTCAAGTA TGTGGCGAAG
GCGGAGGTAG GCCCACGGTT TCAGGCAATC TGCCTCGATC TCGAGGAGTT GCGAGACCTC
GTTCGGCTTA CCCCCTTGCC TGGGCATAAC CTGAGGACGG TAGAAAAGCT TCTGAACACG
ACCACTCCAG TCGTGCGGAA ACTAATCTCC AACGGTCATC TTGCTGCCGA GACAGCCATC
AACCCCGGCA ACAAGACACC TCAGGTCGTC GTGCGGCCGG AAGTTCTCGA GGCATTCGCT
GGGACATTCA TTTCCCTTCA TAACATCGCG ATCGCTCAGA ACACGAACAT CAAGGCCGTG
CGCCGTGATC TCGTGGCCCG CGGGATTCTG CCCGCGATCG ATGGCAAAGA CGTTGGTGCG
ACCTTCTATC GGATGAAAGA TCTGGATCCG AAGTCCTGA
|
|---|
| Protein sequence | MSRLTIKVPF HDGEATSGYA SRLAAANGVD GSDFGALMEI GWLPLLYGKE DALFRLSSVC
GIDVSTLSRG FVRPDSSGTA AAVQINGEQL TKAQVLRWDP RYCPQCVRED IATSTGAVEA
RPYQRLDSLV TFIRTCEAHD VMLRRAEPVV EYRHRRDFAR RIKFEIIEGH LDAAPVVKRH
TAFERYIASR LHGRVTDTPW MDGMPLHVVG RMCEVVGGAE LFGFDFKFRA LSEEDWVDAA
ARGFEIMSRG EVGFVEFLYS LHGNFWKSSA DFGGRSVYGT LYVYLQANPD PGYDSIRNIM
KDIALDNFPL GPGDDFFGTV TCRRVHSVRT GSLISRFADR TLHKLLIAAG LVDPATKGTN
PNKVLINGDR METFIRGADD LLVGPAAREY LGISLSTWKS LLADGFIQPC IRSASGENVK
SLFRRSDLDD FASKLEAQVT APLASRTSFI SLPTAASRVH RPITEVLNFL LAGKLKYVAK
AEVGPRFQAI CLDLEELRDL VRLTPLPGHN LRTVEKLLNT TTPVVRKLIS NGHLAAETAI
NPGNKTPQVV VRPEVLEAFA GTFISLHNIA IAQNTNIKAV RRDLVARGIL PAIDGKDVGA
TFYRMKDLDP KS
|
|---|
| |