17 homologs were found in PanDaTox collection
for query gene Patl_3774 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_3774  hypothetical protein  100 
 
 		 480 aa  980    Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01806  Delta 1-pyrroline-5-carboxylate reductase  53.36 
 
 		 480 aa  527  1e-148  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3609  Delta 1-pyrroline-5-carboxylate reductase  46 
 
 		 478 aa  422  1e-117  Saccharophagus degradans 2-40  Bacteria  normal  1  decreased coverage  0.000164741 
 
 
-
 
NC_010002  Daci_4460  hypothetical protein  38.16 
 
 		 475 aa  305  2.0000000000000002e-81  Delftia acidovorans SPH-1  Bacteria  normal  0.267137  normal  0.0296755 
 
 
-
 
NC_010717  PXO_04086  hypothetical protein  37.97 
 
 		 475 aa  303  3.0000000000000004e-81  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0684  ABC-type transport system involved in multi- copper enzyme maturation permease component-like protein  31.75 
 
 		 479 aa  267  2.9999999999999995e-70  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.507224 
 
 
-
 
NC_009441  Fjoh_3332  ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein  29.73 
 
 		 483 aa  244  1.9999999999999999e-63  Flavobacterium johnsoniae UW101  Bacteria  normal  0.300875  n/a   
 
 
-
 
NC_011071  Smal_2048  hypothetical protein  31.48 
 
 		 487 aa  164  3e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.598539  normal  1 
 
 
-
 
NC_010717  PXO_01817  hypothetical protein  27.23 
 
 		 470 aa  159  1e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.000241267  n/a   
 
 
-
 
NC_009485  BBta_3360  hypothetical protein  30.59 
 
 		 465 aa  152  1e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.435546 
 
 
-
 
NC_013132  Cpin_5322  hypothetical protein  25.73 
 
 		 476 aa  127  4.0000000000000003e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.453004 
 
 
-
 
NC_008228  Patl_3775  hypothetical protein  25 
 
 		 436 aa  63.9  0.000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A3358  putative ABC-2 type transport system permease protein  31.02 
 
 		 301 aa  54.7  0.000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0148865  normal  0.0936569 
 
 
-
 
NC_013037  Dfer_0683  hypothetical protein  31.61 
 
 		 463 aa  51.2  0.00004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_4459  hypothetical protein  22.79 
 
 		 454 aa  45.4  0.002  Delftia acidovorans SPH-1  Bacteria  normal  0.448682  normal  0.0102439 
 
 
-
 
NC_009485  BBta_3359  hypothetical protein  27.12 
 
 		 491 aa  45.8  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.796012 
 
 
-
 
NC_008254  Meso_3124  ABC transporter permease protein  27.27 
 
 		 318 aa  43.9  0.007  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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