Gene Dfer_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0684 
Symbol 
ID8224253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp806812 
End bp808251 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content54% 
IMG OID644928557 
ProductABC-type transport system involved in multi- copper enzyme maturation permease component-like protein 
Protein accessionYP_003085111 
Protein GI255034490 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.507224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA GTTTCATCAA AACGATTGCC CGCCAGGAAT GGCACTCCGT TTTCAGGAGT 
AAAATACCGC TGGCGCTTTT CGCCGTGCTG CTGGTCGTGT CGTTGCTGGC CGTTTTTACC
GGCTGGCAGT ACGTGCACAA TTTCAACCGG CAGCAGCAGG CAGCCCACCA GGAGGTACAC
GACCAATGGA TGAACCAGCC CAACCGCCAC CCGCACCGGG TTGCACATTA TGGTTACATG
GTATTCCGCG AAAAATCGCC GCTCAGCTTT TTCGATTTCG GGCTCGACAG CTATGTGGGC
AATTCCGTTT TCCTTGAAGC GCACCGCCAA AATACCGTGA ACATGAGCGA GGCCGGCTTT
TCCAACGGAA TGCTGCGCTT CGGCGAGCTG AGCATGGCGA TGGTGATGCA GCTGCTTGTG
CCGCTTTTTA TCATTTTTAT CGGCTTTCAA ACCGTCGCCG GGCTTAAACA GAATGGGGTT
TTGAAAATCC TGCTTTGCCA GCGGGCGTCG TACCTGGATG TGCTGCTGGG CAAAACGGCG
GGCCTTACGG CCGTTACCTG GGTGCTATTC GTTCCGTTTC TCGTGCTTAG CCTGGTCGCG
GGCACGGTGA TTACTTCGGG CGGTTTCAGC GCGGATGCGG CATTGCGTAT AGCGCTGATA
GTTGGGCTGT ATGCGCTTTA TTTTCTGGTT ATTACGGTGA TGGTTGTGGG TGTGTCGGCA
GTGAGTAAAT CCGGGAAGAA TGCGTTGATG ACGCTGGTGC TTGTGTGGAT GCTGTTTTTC
ATTGTACTGC CAAAAAGTGC CCAAACGCTC GGCAGCAGCC TGTACGAGGC GCCCGATAAG
ATTGCATTCG AGCAGGCTAT ACTTGCGGAT GTGAGCAAGG AAGGCGATAG CCATAATCCC
GACGATCCGC ATTTCGCCAG CCTGAAAGCC GCAACCCTGA AACGATATGG CGTGGATTCG
ATATCGCAGC TGCCCGTAAA CTACGGCGCG TTGGTGATGC AGGAGGGTGA AAACATCACC
TCAGCGATTT TCAACCAACA TTTCGACCGG CTCATCAGCA CTTACCAGTC CCAGAATGCG
GTATCGTCGC TGCTGAGCTT CGCCGACCCT TATTTATCCA TACGAAACCT GTCGATGAAC
CTGTCCGGCA CCGACTTCGA TACATTTACT GCATTTCAAA AACAGACCGA GCAATACCGG
TTCGAGAAAA CGAAATCGCT GAACGAAATC CATTTGACCC AAATCAAATT CAAGGACGAT
AACAAGCAGA AAGTAAGCGC CCAAAACTGG CAGGAGCAGC CCGATTTCGT GTTCCGGCCC
GTGTCGGTGG CCTATAACCT GGCCGCGGGC GCGTACAGTC TGGCCGCATT GCTCGCGTGG
GTCGCGGGCG GGTTTGGCGC ATTGGCCTAT GTTTCCTCCA AACGTCGATT CCAGCTATGA
 
Protein sequence
MHFSFIKTIA RQEWHSVFRS KIPLALFAVL LVVSLLAVFT GWQYVHNFNR QQQAAHQEVH 
DQWMNQPNRH PHRVAHYGYM VFREKSPLSF FDFGLDSYVG NSVFLEAHRQ NTVNMSEAGF
SNGMLRFGEL SMAMVMQLLV PLFIIFIGFQ TVAGLKQNGV LKILLCQRAS YLDVLLGKTA
GLTAVTWVLF VPFLVLSLVA GTVITSGGFS ADAALRIALI VGLYALYFLV ITVMVVGVSA
VSKSGKNALM TLVLVWMLFF IVLPKSAQTL GSSLYEAPDK IAFEQAILAD VSKEGDSHNP
DDPHFASLKA ATLKRYGVDS ISQLPVNYGA LVMQEGENIT SAIFNQHFDR LISTYQSQNA
VSSLLSFADP YLSIRNLSMN LSGTDFDTFT AFQKQTEQYR FEKTKSLNEI HLTQIKFKDD
NKQKVSAQNW QEQPDFVFRP VSVAYNLAAG AYSLAALLAW VAGGFGALAY VSSKRRFQL