| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4459 |
|---|
| Symbol | |
|---|
| ID | 5750047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4879457 |
|---|
| End bp | 4880821 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641299561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565474 |
|---|
| Protein GI | 160899892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.448682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0102439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGC TTCTGCATGA ATGGCGTCTT CTGACGCGCT CGCGCCTGGC GCTGTGCGCC
CTGGCCCTGC TGTTGCTGCT GTCCACGCTG GCCGTGCTGT CGGGCCTGCG CGAGATCGCC
TCGCAACGCC TGACCCTGGA CCGCCTTGCG CAACTGCAGC AGCAGGACAT GGCGGCCCAG
GCAAGCCGGC ATGCGCAGTC CGGCGATGCA GGCTCGGTGG CCTACTACGG CTTTCACGCC
ACCTGGGATG CGCCATCGTC CACGGCCTTT CTGGCCCTGG GCCTGCGCGA TGCCGCGCCC
TATGTGCTGC GCGTGCGCGC GCTGGCGCTG CAGGCACAGC TGCATGAAGG CGAAAGCTTC
AACCCGGAAC TGGCGCTGGC GGGCCGCTTC GACTTCGCCT TTGTGCTGGT CTACCTGGTG
CCGCTGTTCC TGATTGCGCT GCTCTACGAC CTGGTCTCGG GCGAGCGCGA ATCGGGCCGC
CTGGGCATGC TGCAGGCCAT GCCTGGCACC GGGCGGCGGC TGTGGCTGCG CCGCGCGGGA
CTGCGTTCCG TGCTGGTGCT GGCCTGCGTG GCGCTGCCTG CCCTGGCAGG CGCACTGGCC
GGCGGGGCAG CGGCGGGCGC CCTTGCCACG GTGCTGCTGT CCGCCACGGC CTATGTGGTT
TTCTGGAGCG GCCTGTGCCT GGTGGTTGCC GCGCTGGGCG GCAGCTCGGT CGCCAATGCC
ATGGCCCTCA TGGGCTGCTG GGCCGTGCTG ACCCTGGTGC TGCCCACGCT GGCCAATGCC
GCACTCTCGC GCGCCATCCC CGTGAGCCAG GGCGTGGAGC TGATGCTGGC CCAGCGCCAG
ACCGTGCATG GCGCCTGGGA CCTGCCGCGC GAGCAGACCA TGGAGCGCTT TTTCCGCAGC
CACCCCGAAT GGCGCGACAC CGCGGCTCTG CCTGCAGGCT TTCACTGGAA GTGGTACTAC
GCCTTCCAGC AGCTCGGCGA CGAAAGTGTC GCATCCCAGT TCGCCGCCTA CCGCGCAGGC
CTGCAGGCAC GCCAGGCCTG GACCGGGCGC CTGGGCTGGC TGCTGCCCGG CGTGGGCGTG
CAGGCCGCAT TGCACCGCCA GGCCGGCACC GACCTGCTGG CGCAACTGGC CTATCAGGAC
GACATCGCCG CCTTTCACGC GCGCCTGCGC GCCTTCCTCT ATCCCTACCT GTTTGAGGAC
CGCACATTCG GTGCGCAGGA TTTTGCAGCC CAGCCCGTCT TCACGGCCAG CCCACGGCCT
GCGCGGCAGG CCTGGGGGCA GACGGCAATG CTGTGGGTGG TGGCTGCGCT GGCCTTGCTG
GCCGGCGGTG CTGCCGCAGG CCGCGTGCGG CCGGGCAGGC GCTGA
|
|---|
| Protein sequence | MSWLLHEWRL LTRSRLALCA LALLLLLSTL AVLSGLREIA SQRLTLDRLA QLQQQDMAAQ
ASRHAQSGDA GSVAYYGFHA TWDAPSSTAF LALGLRDAAP YVLRVRALAL QAQLHEGESF
NPELALAGRF DFAFVLVYLV PLFLIALLYD LVSGERESGR LGMLQAMPGT GRRLWLRRAG
LRSVLVLACV ALPALAGALA GGAAAGALAT VLLSATAYVV FWSGLCLVVA ALGGSSVANA
MALMGCWAVL TLVLPTLANA ALSRAIPVSQ GVELMLAQRQ TVHGAWDLPR EQTMERFFRS
HPEWRDTAAL PAGFHWKWYY AFQQLGDESV ASQFAAYRAG LQARQAWTGR LGWLLPGVGV
QAALHRQAGT DLLAQLAYQD DIAAFHARLR AFLYPYLFED RTFGAQDFAA QPVFTASPRP
ARQAWGQTAM LWVVAALALL AGGAAAGRVR PGRR
|
|---|
| |