14 homologs were found in PanDaTox collection
for query gene Patl_1922 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_1922  phytanoyl-CoA dioxygenase  100 
 
 		 390 aa  811    Pseudoalteromonas atlantica T6c  Bacteria  normal  0.902766  n/a   
 
 
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NC_010678  Rpic_3916  Phytanoyl-CoA dioxygenase  26.19 
 
 		 263 aa  48.1  0.0003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
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NC_012857  Rpic12D_4030  Phytanoyl-CoA dioxygenase  26.19 
 
 		 263 aa  48.1  0.0003  Ralstonia pickettii 12D  Bacteria  normal  0.0676207  normal  1 
 
 
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NC_013947  Snas_3392  Phytanoyl-CoA dioxygenase  29.11 
 
 		 260 aa  47.8  0.0003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.325628 
 
 
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NC_003296  RS05217  hydroxylase protein  29.46 
 
 		 263 aa  47.4  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_4437  Phytanoyl-CoA dioxygenase  29.85 
 
 		 285 aa  47.4  0.0004  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
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NC_007947  Mfla_1239  phytanoyl-CoA dioxygenase  25.48 
 
 		 295 aa  47  0.0005  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  0.424145 
 
 
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NC_013037  Dfer_2103  Phytanoyl-CoA dioxygenase  27.66 
 
 		 283 aa  46.6  0.0008  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.549141 
 
 
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NC_008228  Patl_1961  phytanoyl-CoA dioxygenase  26.62 
 
 		 260 aa  45.8  0.001  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.00281638  n/a   
 
 
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NC_013440  Hoch_4055  Phytanoyl-CoA dioxygenase  28.15 
 
 		 265 aa  44.7  0.003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.14003  normal  0.288742 
 
 
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NC_013947  Snas_3564  hypothetical protein  24.1 
 
 		 239 aa  44.3  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
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NC_007912  Sde_1259  Type I secretion membrane fusion protein, HlyD  27.63 
 
 		 253 aa  44.3  0.004  Saccharophagus degradans 2-40  Bacteria  normal  1  hitchhiker  0.000199096 
 
 
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NC_013061  Phep_4113  Phytanoyl-CoA dioxygenase  26.95 
 
 		 300 aa  44.3  0.004  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
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NC_007348  Reut_B5568  phytanoyl-CoA dioxygenase  25.83 
 
 		 270 aa  43.5  0.007  Ralstonia eutropha JMP134  Bacteria  normal  0.172876  n/a   
 
 
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