Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3392 |
Symbol | |
ID | 8884591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3594219 |
End bp | 3595001 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003512149 |
Protein GI | 291300871 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.325628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGACC AGGCAACCGT TCTCGAGCAG TACCACCGTG ACGGCTACGC GATCTTCCGT GACGTCCTCG ACGCCGAGCT GGTCGCCGAG GCCAGCGATC ACGTGGAGTG GTTGCAGCGC AAGCATCCCG ACGTGCGTCC CGAACAGCTG GGGCACCAGT ACCTGCGCGA CGATCCCTTC TGGATTCGGC TGGTCTCCGA CGACCGGCTG GTCGACATCG CGGAACTGTT CGTCGGCCCG GACATCGCCT TGTTCGCCTC GCACTACATC AGCAAGCCGC CGTTCTCCGG GCAGCCGGTC CTGTGGCACC AGGACGCGGC GTTCTGGCCG CTGGAGCCGA TGGAGGTCGT CACGTTGTGG TTGGCGGTGG ACCACTCCAC TCCCGAGAAC GGTTGCGTGC GGCTCATTCC CGGCAGTCAC ACCACCCCGA CCGCGGCGAC CCGGGACGCC GCGGAGGTCG ACAACGTCCT CGGCGCGGAG ATCGCGGTCG AGGTGGACGA GGCCCGCGCC GTCGACATGG TGCTGGCGCC CGGTGACGTC GAGGTCCACC ACCCCAACAT CGTGCACGGC AGCAACGCCA ACACTTCGGC GAAGCGTCGC TGCGGACTGA CCATTCGCTA CATTCCGACG TCGACGCGCA TCACCGGTGA CGAACAGCCC TTCCCCAGCG CGTTGTGGCT TCGCGGCGAC AGGGGCGTCA ACACATACCA GCCCGTGCCT GATTTCGACG CGGGGCGGCA CTTCCGGTAC CGGGGCGCTG GCGAGGGTTC CTCGCGGCGC TAG
|
Protein sequence | MVDQATVLEQ YHRDGYAIFR DVLDAELVAE ASDHVEWLQR KHPDVRPEQL GHQYLRDDPF WIRLVSDDRL VDIAELFVGP DIALFASHYI SKPPFSGQPV LWHQDAAFWP LEPMEVVTLW LAVDHSTPEN GCVRLIPGSH TTPTAATRDA AEVDNVLGAE IAVEVDEARA VDMVLAPGDV EVHHPNIVHG SNANTSAKRR CGLTIRYIPT STRITGDEQP FPSALWLRGD RGVNTYQPVP DFDAGRHFRY RGAGEGSSRR
|
| |