| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1922 |
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| Symbol | |
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| ID | 4172768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2328219 |
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| End bp | 2329391 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054930 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_661494 |
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| Protein GI | 109898239 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.902766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAG ATATCAGCGC GTCTATCGAC GCCTGCGCGA CTCACTATGG TGACAATGCT
GACGCAATGC GACAATACCT ACTAGACGGA CAAGCCAAAG CGGTTGCACT GCCGAATCGC
GGACCTTTGC TATTTAATCA ACAGGGCCAG TTAGACAAGA AGATTTTAGA GGCGTACGAC
ACATATGGGT TTTATATCTT CGAAAATGTG TTAAGTGCGC GTGAGCTTGC AGATATAGAG
CAAGATTTGG CTCAGTTGAA GCAACGATTT GCTACTGAAA ACGGTGCAAC GGTGAATGCA
AAAGGTGAGC CCGCATTAGG CGTAGATTGC AAAGCCCCTA ATCTCCTTTG GGCTAAACCA
TTGGGGGATC CTTTAGGGGG AACTCCCATC GCAAACGGCC GTCATCAAGT GAAATTGTTC
GAGCCGACCG CAGCCAGTAA CGCCCCAAAA GAATCACCGT TTGTATTGCT AGGATCATTG
CAGTTCTCCC CTGCTTGCTT GCGCGTGTAT GCTCACCCTG AATTATTAAA AGTAGCGGAA
GCGATTAATG GGCGAGACTT TGCGCCGTTT CATGAATGTT TATTTATCAA GGAGCCAGGC
TTAGGGGCAG CGGTCTCTTG GCATCAAGAT GGGGATACCC ATTGGGACAA CCCTGAGTTT
GATTCACAAA TTCATGGTTT TAATTTCATG GCACAAGCTT ACGGCAGCAC AGCGGTCAAT
GGTGTGTGGG TGGTCCCTGG CTCACACAAA GAAGGTAGAA AAGACATAAA GCAATTGGTC
AAAGAGGCCG GCAGCGAACG CATTCCAGAT GCACTACCGA TTATTTGTAA CCCAGGCGAT
GTGGTTATCT GTAATCGTCA ACTGGTTCAC GGTTCATTTG CTAATACTGG GTTCGAACCA
CGTATTACTA TCAACTTTGG CTTTCATAAG CGCTCGTCTG TGCTGGATGT AAAAGGCGCG
GGTATTCACA GTGAAGCCGT GGTGTATGAC GAAAAACTAA TTGAGCAGCG CTCCCATGCT
CTGGGCTACG CCATTGAGGC GCGAAAAGCA CAATACCCAG ATGAAACCGC TTACCAGTAT
CAGCCTCTTG CCCACAGCAA AGTAGATTTC AGTTGGCAAA CCAATACCTT AGATAAGCTC
AAAGATTACA ACCTACTTGA TTTAAGTATC TAA
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| Protein sequence | MMKDISASID ACATHYGDNA DAMRQYLLDG QAKAVALPNR GPLLFNQQGQ LDKKILEAYD
TYGFYIFENV LSARELADIE QDLAQLKQRF ATENGATVNA KGEPALGVDC KAPNLLWAKP
LGDPLGGTPI ANGRHQVKLF EPTAASNAPK ESPFVLLGSL QFSPACLRVY AHPELLKVAE
AINGRDFAPF HECLFIKEPG LGAAVSWHQD GDTHWDNPEF DSQIHGFNFM AQAYGSTAVN
GVWVVPGSHK EGRKDIKQLV KEAGSERIPD ALPIICNPGD VVICNRQLVH GSFANTGFEP
RITINFGFHK RSSVLDVKGA GIHSEAVVYD EKLIEQRSHA LGYAIEARKA QYPDETAYQY
QPLAHSKVDF SWQTNTLDKL KDYNLLDLSI
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