13 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_52248 on replicon NC_011682
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011682  PHATRDRAFT_52248  alpha mannosidase  100 
 
 
173 aa  360  5.0000000000000005e-99  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011679  PHATR_52108  glycosyl hydrolase/mannosidase  36.73 
 
 
974 aa  103  8e-22  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0070  glycoside hydrolase family protein  29.45 
 
 
937 aa  48.9  0.00004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1249  glycoside hydrolase family protein  25.81 
 
 
1371 aa  48.5  0.00004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.324048 
 
 
-
 
NC_008146  Mmcs_0963  glycoside hydrolase family protein  25.48 
 
 
1374 aa  48.1  0.00005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0981  glycoside hydrolase family protein  25.48 
 
 
1374 aa  48.1  0.00005  Mycobacterium sp. KMS  Bacteria  normal  0.239974  normal  0.147978 
 
 
-
 
NC_009077  Mjls_0991  glycoside hydrolase family protein  25.48 
 
 
1368 aa  48.1  0.00007  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008698  Tpen_1628  glycoside hydrolase family protein  24.09 
 
 
1032 aa  42.4  0.003  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_012848  Rleg_4705  glycoside hydrolase family 38  21.9 
 
 
1008 aa  42.4  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10661  alpha-mannosidase  23.87 
 
 
1398 aa  42  0.005  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  0.00000236587  normal  0.132856 
 
 
-
 
NC_007413  Ava_4452  glycoside hydrolase family protein  21.94 
 
 
1058 aa  41.6  0.006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4785  glycoside hydrolase family 38  21.17 
 
 
1008 aa  41.6  0.006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.470761  normal 
 
 
-
 
NC_009953  Sare_1084  glycoside hydrolase family protein  26.32 
 
 
1398 aa  40.8  0.009  Salinispora arenicola CNS-205  Bacteria  normal  0.503572  normal  0.0341362 
 
 
-
 
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