| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1628 |
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| Symbol | |
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| ID | 4601031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1573072 |
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| End bp | 1576170 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639774401 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_921026 |
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| Protein GI | 119720531 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAC GCGACGCCGA GAGGTCGCTG TTCGACCTTC TGGTAGCGTC CGTTCAGAGG
TACATCCCGC TCTCCGTCTG GAGGCTCGAC GGGAGGGAGA AGTTCCTACC GGTACGCGTG
CAGGCTGAGC CGGGTAGGAT CTACGAGTTC GTCGGGAAAG CTAGGGTCCC GTCGAGCGAG
CACAGGTGGT TCGCGAAGTT CGTCCTGAGC GGGAACGCTA CGCTCGAGGT CGACGGGAGG
CTGGTAGGCG GGATAGACGA AGCGCACACG TACTTCCCGC TGGACCCGGG GCTCCACGAG
CTGAGGATTA GGGCTTCGCC GAGGGGGATG TTCGGCTTCC ACGACTGGAG CCTGAGCTTC
GAGAAAGCCT TCCTCGCCGA GGTGTACTGG CGCGGCTTCT CGCTCGCGCT CAAGCTACTC
TCCCTCGTGT CCTACCTCAA GTCCCTTCCC CCCGACGACG CGGTGAGGAG GAGGGTCGAA
GGGGAGCTCT TCGACGCCTT GATGTCCGCT CCCGTCTCGC CGAGCGTGCT CCAGATAACG
GTGGCGTTGA GCCTCCTCTA TGAGGGCGGG AGGAGCTTCT CGAGGGGGGA CCTGCCCGAG
AGGTACGGGG ACTACGCGTG GCTCTCCGGT GTCTACGGCG CCGGGATCCT GGGCGGCAGG
CTCAGGGACG TGGGCGCGTC GAGCCTCGAC GACGTGAAGC GCGCCTGCGA CAGGCTGGAG
CCCCTCCTCT CACTCCTCGA GGAGCTGAGG AAAAGCCAGG AGGGCGCGGG GGAGCTCTTC
ATAGTTGGGC ACAGCCACAT AGACGCCGCG TGGCTCTGGC CCGTGCAGGA GACCAGGGAG
AAGGTCGCGA GGACGTTTGC GAACGTGGTC TCGCTCCTGA GGGAGTACGG GGGACCCGTG
TACGCGCAGA GCTCGGCGCT GTACTACGAG TGGGTCGAGG AGGACTACCC GGAGCTTTTC
CGCGAAATCA AGCGCCTCGT CGAGTCGGGT AGGTGGATAC CGGTTGGGGG CATGTGGGTT
GAGAGCGACG TCCAGCTCGT GGAGGGGGAG AGCCTGGCGA GGCAGTTCCT GTACGGCCAG
AGGTACTTCT ACTCCAGGTT CGGGAGGACA GCCCGGATCG GGTGGATACC GGACAGCTTC
GGCTTCCCCT ACTCGTTGCC CCAGCTACTC GTCAAGAGCG GGCTCGAGTG CTTCGTGACG
CACAAGGTGC TCTGGAACGA TACCAACGAG TTCCCCTACC ACTCCTTCCT CTGGAGGGGG
GTCGACGGCT CCACTATACC CGTCCAGATC CTCCTGAACA GCTACAACGA GATGCTCACC
CCGGGAAGCG TGAAGGCGTA CTGGTCCAGG TACAAGCAGA GGGGCGAGGT CCCCTTCCTG
CCGTACGCCT ACGGCTACGG GGACGGGGGA GGGGGGCCGA CCAGGGAGAT GCTCGAATCC
CTCGATGTCG TCAAGAGGCT CCCCGGGTTG CCGAGGCTCA GGCACCTGGA AGAGGAGGAG
TACCTGGCGA GGCTCAAGGC TTCCGAGGGC TCGATGCCCG TGTGGGACGG GGAGCTCTAC
GTGGAGTTCC ACAGGGGGAC CTACACCACG AACCTACAGG TAAAGGAGCT GATGTGGAGG
GCGGAGCTAG CCCTCCTGAC AGCCGAGGAG GTCGCCTCGC TCGCATCCTC CAGGACGGGG
GAGGGGCTGT CGGCGCGCCT CGAGAGGCTC TGGAAGACCC TCCTCCTGCA CCAGTTCCAC
GACATCCTGC CGGGGTCCTC GATGAAGGAG GTCTACGAGG ACGCGTACAG GGACCTCTCG
ATGGTCCTGC GGGAGGCCTC CTCCCTGGCC CGGGAGGCCC TCGAAGCCTA CCTGGGGGGC
GGCGAAGGCG GGGTCGCAGT CTTCAACCCC CTGCCGTGGC CCCGGAGGGC TATCGTCTCC
CTCCCCATGG GCATGGCGCC GCGCGGCGCG GAGTGCCAGG AGTCGGAGGA GGGGGTTCTG
GTCGAGGTCG AGCTACCGCC GGCCGGCTAC CGCGTCTACA GCGCGTCGGG CGGGTGCGTG
GATGAAGGGG AGCCGCTGAG AGTAGAGGAG GTCGACGGCG GGATACTGCT CTCCAGCGGC
GCAGTCGAGG TGGTGGTAGA CCGGGACGGC TCGCTGGGGT CCGTGAGGTT GCTCCCCGGC
GGAGAGGAGG TGCTGTCGCG GCCATCAAAC CAGCTCCGCG TGCACTTCGA CAGGCCGGGG
GTTTTCGACG CCTGGGAGCT TACGGACGAC TTCCTGTCCA GGTGGGAGGA GGCGAGGACG
CTCTCGGAGC CCAGGCTCGT TGAGCGCGGG CGGCTGAGGG CGTGCGTCGA GTACGTAAAG
GGCTTCGGCA AGTCCAGAGT TACGCAGAGG GTGTGCGTCT ACAGGTTCAG CCCCGTGGTG
GAGGTGAAGA CGAGGCTCGA GTGGTTCGAC AAGGGGTTCC TGGTGAAGGC CTGGATGAAG
CCAGCGTTCA AGCCCACCGC GGCTGTCTTC GAGACCCCCT ACGGCGTCGT GTACAGGAGC
CCGGCTTGGG CTTCGAGCAT CGACAGGGCG AAGTTCGAGG CGCCAGCGCT CAGGTGGGTC
GACGTCTCCG ACGGCGCTAG GGGCTTCGCG GTGATAGCCC CGGGGAGGCA CGGCTACTCC
GTCCGGGAGG ACTACGTTAG CCTCAGCCTC CTCAAGTCCC CCACGTTCCC GAACCCGTGG
AGCGACGTGG GGGAGTTCGA GACGACGTAC TACATCTACC CGCACCTAGG AGGCTACGAG
GAGGCACGCG TAGCCTTCGT GGCCGCCGAG CTCCTCAGGC AGCCCCTCGC CGTGGCTACG
GCGCCTGTAG AGCGCTCCGA GAGCTTCCTC TCCGTCAACC CCCCGGAGGC CCTCCTAGGG
GCGTTTAAGG CGGCGGAGGA CGGGGACGGC TACGTGATGA GGCTGTACAA CCCCCACCGC
GGAGAAGTAG AGGTGGAGGT AGAGGTGAAC GTCCCCTTTA GGGAGGCCGT GGAGGTAGAC
ATACCGGAGC TGAGGGTCCT GGGGAGGGTG GAGGTGTCGG GCGGCAAGCT ACGCTTAAGG
CTCAAGCCCT TCGAGGTAAA AACGGTAAAG CTCAGGTAG
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| Protein sequence | MKLRDAERSL FDLLVASVQR YIPLSVWRLD GREKFLPVRV QAEPGRIYEF VGKARVPSSE
HRWFAKFVLS GNATLEVDGR LVGGIDEAHT YFPLDPGLHE LRIRASPRGM FGFHDWSLSF
EKAFLAEVYW RGFSLALKLL SLVSYLKSLP PDDAVRRRVE GELFDALMSA PVSPSVLQIT
VALSLLYEGG RSFSRGDLPE RYGDYAWLSG VYGAGILGGR LRDVGASSLD DVKRACDRLE
PLLSLLEELR KSQEGAGELF IVGHSHIDAA WLWPVQETRE KVARTFANVV SLLREYGGPV
YAQSSALYYE WVEEDYPELF REIKRLVESG RWIPVGGMWV ESDVQLVEGE SLARQFLYGQ
RYFYSRFGRT ARIGWIPDSF GFPYSLPQLL VKSGLECFVT HKVLWNDTNE FPYHSFLWRG
VDGSTIPVQI LLNSYNEMLT PGSVKAYWSR YKQRGEVPFL PYAYGYGDGG GGPTREMLES
LDVVKRLPGL PRLRHLEEEE YLARLKASEG SMPVWDGELY VEFHRGTYTT NLQVKELMWR
AELALLTAEE VASLASSRTG EGLSARLERL WKTLLLHQFH DILPGSSMKE VYEDAYRDLS
MVLREASSLA REALEAYLGG GEGGVAVFNP LPWPRRAIVS LPMGMAPRGA ECQESEEGVL
VEVELPPAGY RVYSASGGCV DEGEPLRVEE VDGGILLSSG AVEVVVDRDG SLGSVRLLPG
GEEVLSRPSN QLRVHFDRPG VFDAWELTDD FLSRWEEART LSEPRLVERG RLRACVEYVK
GFGKSRVTQR VCVYRFSPVV EVKTRLEWFD KGFLVKAWMK PAFKPTAAVF ETPYGVVYRS
PAWASSIDRA KFEAPALRWV DVSDGARGFA VIAPGRHGYS VREDYVSLSL LKSPTFPNPW
SDVGEFETTY YIYPHLGGYE EARVAFVAAE LLRQPLAVAT APVERSESFL SVNPPEALLG
AFKAAEDGDG YVMRLYNPHR GEVEVEVEVN VPFREAVEVD IPELRVLGRV EVSGGKLRLR
LKPFEVKTVK LR
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