| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_52108 |
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| Symbol | |
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| ID | 7204628 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 280077 |
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| End bp | 283174 |
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| Gene Length | 3098 bp |
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| Protein Length | 974 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | glycosyl hydrolase/mannosidase |
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| Protein accession | XP_002185676 |
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| Protein GI | 219120889 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTACGTTC ACATTGTTCC ACATACGCAC GACGATGTGG GATGGCGTAA AACCGTTGAG
CAATATTACT ACGGCCTCAA CAATTCCATC GATACTAGAG GTAGCGTACA CTCCATCATC
ACGACCGCCG TGGAATCACT TTTGGACGAT CCAGCGCGTA CCTTTACGTA CGTGGAAATG
AAATTTCTCT CCATATGGTG GAAGTCTCAA AGTGACCAAA TGAAAGACAA CGTTCGCTAC
CTAATTGCCA ACAAGCAGCT ATCGATTGTC AACGGAGGTT GGTGTATGCA TGACGAAGCG
GCGCCCCACT ATATCGGGAT GATTGATCAG ACAAGCTTGG GACATGAATT CCTTACTCGT
GAGTTAGGAG TGATACCTAA GGTTGGCTGG CAACTCGATC CTTTCGGTCA CTCCGCGACG
CAGGCATCCT TGATGTCGCG TGGTATGGGA TTCGATGCAC TATACTTCGG TAGGATTGAT
TATCAGGATT TACGGCTGAG GCAGTTAACA CGTCAGTGCG AGGGTTTGTG GAACGCATCA
AGAGAGTCGT CAGACATCGC ATTACCAATC TTTTGGGGGC TGACGGGAAG CTATGGAGGA
AACTATGGTG CCCCGCGAGG TTATTGTTTC GACGTATTGT GTCAAGATGA ACCTCTGGTC
GGTGCCAACG AAACGAGACT ACGGGAACGG CTTCGTACGT TTTTGGAAGA TGTGCGTATA
CAGAGTGATC GTACCCAGGG TGATCACGTT ATGGTGACAA TGGGTGAGGA CTTTAACGTA
AGTGGTGGGG GTGAAAAGAT CGATGCAAGG ATGCTGCCAA ATTGTCAGTA GGATTCCTGA
CCTGCATTTT TATCTCCAAA TTCCAGTACA TACAAGCGCA TTTAAATTTT GCAAATATGG
ATCTATTGAT AAACTCGATT ATGAGCTACC AGCATTGGAA GATTCTGGAT ATACCGTCTA
TCTTTGGTCC CCAGTACGAT CGAGTCGACA TCTTCTATTC AACACCGGAC TACTACACAG
AGATGAAGTA CAAAGAGACG GTCCGTGTTC GCAATAGACC GCGGACTATG CAACGCGGGA
CATCCAATTC AGCTGTAGGA CAACAAGGAC AACACGTGTC GGAGAGTCCA GTCTGGGTAG
TCAAAACGGA CGACTTCTTC CCGTATTCTG ATTGTGAGCA TTGTTTCTGG ACAGGTTATT
TTACCTCTCG TGCATCTTTC AAACGGTTTG AACGTGTTTC GTCTTCTTTT CTTCTGGCTG
CCCGACAAAT TGAGGCATTG TGGAGTGGAC AGAGTAACAG CACGGGTCAA GGTATGGAAA
GTCGTCCCCT GTTTGCACTC GAGGATGCTT TGGGTATTGC GCAGCATCAT GATGCCGTGT
CTGGTACGGC AAAGCAACAC GTAGCGGATG ATTACAGTTT CAAATTACAA ACTGGTTTGG
ATCTTGCTTC CAAGTTTGTG GCAAAGACAT TAAAGAATAC GCTGATATCG GACTCAGGGC
TGCTGGAAAA CTTGACTTTC TGTCACCAGT TGAATGAATC TATTTGCGAT CTTTCACAGG
ATGCCACGAA GTCTCTTGGC AAGGATCTTT ATGTTGTTGT TTACAATGCA AAAGCCTCGG
AGGTATCCAG CATTATCCGA CTACCGGTCT CTACTAACCA AACGTACCTT GTTGAGCGTG
TGGAGCGTAA CGCAACGGTC GCGAGGTCGA GACTTGTGGA GACTGTACAA GCCGTCAACC
TCCGGACTAC TGACAAACCG AGGTATACCG TTATGTTTGA CACTGGTCCC CTTCCTCCCA
TTGGTGTTGC TTTATTCCGC GTATCTATGA CAAATAAAGT CTTCTCTAGT TCTTTGAGAT
CGAATGATTT GACGGAAACT CGACGTCTCT TTCGAGCTGC CGACGGCAAA GATGTTGTAG
TATCGAATGA ACTTCTCTCA GTAACCTTTG ACAGCTCTAC TGGAATGATG AAACAGGTAT
TCTCTCAGAA TGTGAGCCTT CTGCTTACGC AGGAATGGGG GTACTACACG TCTTTCGACT
CGGACTATGA TAGAACGGAA GTGCCCTCTT CACGTGCCGA TCAAAATTCA GGAGCCTATG
TGTTTAGACC AAGCACTCCT GAAGAAAAGC TTAAGTTGAT GAATGCGTCG CCTAGCGGTG
CAAAGTTCGT CGATACGTCG GTGGGAACTG AAGTACACGT AGCATTTGAT GCGCCCTGGA
TTAGGCAAGT GACTCGCATA CTGAAAGGTC AGCCATACGT GGAAATCGAG TATACCATCG
GTCCAATTCC GATCGATGAT GGGCGCGGAA GGGAGATTGT GAATCGATAC ATAACTCCAA
TTAAATCCGA AGGCAAGGTG TACACAGACT CGAACGGTCG CGAGTTTCTG GAGCGACGCC
GCAATTACCG TCCAAGTTGG TCTTTGGAGG TTTACGAACA AGTGGCCGGG AACTACTACC
CGATCAACGC AGCCGCTTAT ATTGAAGACA GCGACGCGGC TTTGTCAGTG GTCGTGGATC
GGTCCCAAGG TGGTGGCTCT ATTATAGATG GAACGTTGGA GTTCATGGTG CAGCGTCGGA
CTGTGGCGGA CGACTTTCGG GGAGTAGACG AACCGTTGAA CGAGACGTGT GGCGGTATGG
AGCCGTATCC TCCGTACGGG GACGCAAAAC GCGTGGGTGA CGGCGTGGTG ATTCGTGGCG
TCCATCGGCT ATTGGTGGGA GCAAAAGGGG CTGGGTTGGC TAGATCCCAG ATGGACGCCA
CGTTTGCGGA GCCATTAATC TTTGTGGCAT CGTCGCCCAA ACCGTCTACA CCAGTAGGCG
CACTAGTCGC TACGCAATCA TCTCTTTCCG CTCTGCAATT ATCGTTGCCA TCAAATGTAA
TGTTGATAAC GTTGATGCGT CTTCAGGATC GGGAGCGACC GACTTGGCTC CTGCGATTGG
GTCATCAGTA CGCTGCGGGT GAACACGAGG TTCTTTCTCA GCCGGCCAAG GTAAATCTCG
CCACGTTTCT AGTGGATTGG GATGTGTCCA AGATCGAGGA AAAGACCCTG TCGGGCAATC
GGGATTGGGA CGTTTACACG AAAGAACGCT ACGACTGG
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| Protein sequence | LYVHIVPHTH DDVGWRKTVE QYYYGLNNSI DTRGSVHSII TTAVESLLDD PARTFTYVEM
KFLSIWWKSQ SDQMKDNVRY LIANKQLSIV NGGWCMHDEA APHYIGMIDQ TSLGHEFLTR
ELGVIPKVGW QLDPFGHSAT QASLMSRGMG FDALYFGRID YQDLRLRQLT RQCEGLWNAS
RESSDIALPI FWGLTGSYGG NYGAPRGYCF DVLCQDEPLV GANETRLRER LRTFLEDVRI
QSDRTQGDHV MVTMGEDFNY IQAHLNFANM DLLINSIMSY QHWKILDIPS IFGPQYDRVD
IFYSTPDYYT EMKYKETVLW VVKTDDFFPY SDCEHCFWTG YFTSRASFKR FERVSSSFLL
AARQIEALWS GQSNSTGQGM ESRPLFALED ALGIAQHHDA VSGTAKQHVA DDYSFKLQTG
LDLASKFVAK TLKNTLISDS GLLENLTFCH QLNESICDLS QDATKSLGKD LYVVVYNAKA
SEVSSIIRLP VSTNQTYLVE RVERNATVAR SRLVETVQAV NLRTTDKPRY TVMFDTGPLP
PIGVALFRVS MTNKVFSSSL RSNDLTETRR LFRAADGKDV VVSNELLSVT FDSSTGMMKQ
VFSQNVSLLL TQEWGYYTSF DSDYDRTEVP SSRADQNSGA YVFRPSTPEE KLKLMNASPS
GAKFVDTSVG TEVHVAFDAP WIRQVTRILK GQPYVEIEYT IGPIPIDDGR GREIVNRYIT
PIKSEGKVYT DSNGREFLER RRNYRPSWSL EVYEQVAGNY YPINAAAYIE DSDAALSVVV
DRSQGGGSII DGTLEFMVQR RTVADDFRGV DEPLNETCGG MEPYPPYGDA KRVGDGVVIR
GVHRLLVGAK GAGLARSQMD ATFAEPLIFV ASSPKPSTPV GALVATQSSL SALQLSLPSN
VMLITLMRLQ DRERPTWLLR LGHQYAAGEH EVLSQPAKVN LATFLVDWDV SKIEEKTLSG
NRDWDVYTKE RYDW
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