| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4452 |
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| Symbol | |
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| ID | 3680386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5573021 |
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| End bp | 5576197 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719806 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_324945 |
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| Protein GI | 75910649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTA CCGAATCTCA GTATCAGACA GATTTAATCT CAGACACAAT TGAGAAATTA
CGCAGTTGTT GTCAAGTTAA TGTTCAATCT ACTTGGTTAT ACCAGGACTC GAACACAGAA
ATTACTGGCG TTGCTACATC TAGTATATCC AATTGGCAAC CTGTAGAGTT AGATACCAAG
GGTAACATTG CTTGGACTGG TGGACAGCAA GTACTTTGGC TAGAACAGAA ATTCGTAGTT
CCCCAAAATT TACATGATTA TCCTTTGGCG GGGTTGTCTT TGCGGCTGTC TCTACTTTGG
TGGGCGGACT CTGCCAAAAT CTACGTGAAT GGGCAATTAG TGCTAGAAGG AGATTTATTT
GATTGTTCCC CCAGAGTTTT ACTCAGTCGG GAAGTATCAC CAGGACAAGA ATTTGTAGTG
GCTTTGCGGC TGGCGAGTCC TGGTCATTGT GATGGTGCTT TAGTGCGATC GCTCCTTGTC
TACGAGTCTA CAGATTATAA TTATCCTGAC CCCGGTTTTA TTGCCGATGA GTTAGCAATA
TTACAGCTTT ATTTAGAAAA GTTCGCCCCA GAAAAGTTAA ATATCCTCAC ACAAGCAATC
CCAGAAATTC ATCCCTCCAA CCCAGAATCT CTAGTTACCT TCCGTCAAAA CCTGATAAAT
CATCTCTCTA TCAGCGACCC AAAATTTAAA ATCTATTTAT TAGGTCACGC TCATTTAGAT
TTAGCATGGC TATGGTCAGT CAGTGAAACT TGGAATGCAG CCCAAAACAC TTTTACATCA
GTCCTCAAAC TACAACAAGA TTTTCCCGAA TTAATCTTCT GTCATTCCAC CCCAGCCCTG
TATGCTTGGA TTGAAGAACA TCGTCCAGAT TTATTTACAG CGATTCAACA AGCTGTAGCT
GCCAAAAAAT GGGAAGTTAT CGGCGGTTTT TGGGTAGAAC CTGACCTTAA TTTAATCGCT
GGGGAATCCA TAGTCCGTCA GTTACTATAC GGTCAACGCT ATTTCCAAGA AAAATTTGGC
AAACTGACGA CTGTAGTTTG GGTTCCCGAC ACCTTTGGTT TTTGTGCAAC CCTACCGCAA
TTTTTGGCGA ATGCAGGTAT TGAGTATTTC GTGACGCAAA AATTACGATG GAACGATACT
ACTAAATTTG ATTATGGGGC TTTTTGGTGG CGATCGCCTG ACGGTAGTCA AGTATTAAGT
GTTATGTCTG CAACCATAGG CGAAGGCATT GACCCCATCA AAATGGCAGC CTATTCTCTA
GAATGGCAAA CCCAAACCTG CTTAACTCAA TCTTTATGGC TTCCTGGTGT CGGTGACCAC
GGCGGCGGCC CCACCCGTGA TATGTTAGAA ACCGCCCAAC GCTGGCAAAC TTCACCATTT
TTCCCAGACC TAGAATTTAT CACCGCCGAA AAGTATCTCC AGCAAATTCA GTCAACGGTC
AATGGTCAAC AGTCAATAGT CAATAGTCAA CGGTCAACAT TTCCTATATG GAATGATGAA
CTATATCTAG AATTTCATCG TGGTTGTTAC ACTACCCACG CAGACCAAAA ACGTTGGAAT
CGGCATTCTG AAAATTTACT ATACGAAGCC GAACTATTTG CTACCTTGGC AACTTTTATC
TGTGGCGTGA CATATCCCAA ATCCGACATC GAAACAGCTT GGAAGCAAGT ATTATTTAAC
CAATTCCACG ATATTTTACC TGGTTCTTCC ATTACCCAAG TATATACAGA TGCCTTGCCC
GAATGGCAGC AAGTCGAACA AACGGGAACC AAAATATTAA AAGAATCATT ACAGGCGATC
GCATCTCACT TTACTCTACC AGAGCCACCA AAAACCGATA GTCTACCCAT TTTCGTTTTC
AATTCTCTCA ACTGGCAGCG CTCTGAGGTA GTATCAGTCA CCCTACCCCC ACCACCACCT
AACCAACAAT GGCAAGTCTA CGATACTACT GGCAAACAAA TCATTTCCCA ATTAACTGAA
CCATCAACCA TACTATTCCT CGCCGAAGAT ATTCCCTCTG TAGGCTATCG CCTCTTTTGG
CTTTCCCCCA CATCGCCCAC ATCTTCCACA TCGCCCACAT CTTCCACATC CCTAGACTAT
ATTCTCGAAA ATGAACACCT GCGCGTTATT GTAGATCCTG ATACTGGAGA TTTATCAAGT
ATCTATGACA AAACTCATCA ACGAGAAGTA TTGTCTGGTG CGGGTAATCA ACTACAAGCT
TTTAAAGACA GTGGTCAATA TTGGGATGCT TGGAATATCG ACCCCAATTA TAGTCAGCAT
CCCCTACCAG CAACTAACCT CAAATCTATC CAGTGGTTAG AACAAGGAAC TGTACAGAAT
TGTCTCCGCG TAGTGCGTCA ATTGGGTAAG TCGGAATTTT GCCAAGACTA TATCTTGCAA
GTCGGCTTAC CCCAATTGAA AATCGTTTCT AGAGTCAATT GGCAAGAAAA GCACGTTTTA
GTCAAAGCAG CGTTTCCTCT CAACGTTACA GCCGACTTTG CCACCTACGA AATTCCCTGC
GGTGCAATTC GTCGCCCGAC TCAACCCCAA ACCCCGCAGG ATAAAGCAAA ATGGGAAGTC
CCAGCTTTAC GTTGGGCTGA TTTAACAGCA GAGACAGATG AGGGTCTTTA CGGTGTTAGT
TTACTGAATG ATTGTAAATA TGGTTACGAC AGTCAACCCC AGCTATTAAG GCTAACCTTA
CTCCGTAGCC CTACTTGGCC TGACCCAGAA GCTGACACAG GCGGCATACA CGAATTTGCT
TATACTGTGT ATCCTCACGC TGATAGCTGG GAATCAGCCC ATACAGTACA AAAGGGATAT
GAATTAAACA TTCCCCTGCA AGTAATATTA AACCCAACTC AACACTTCCA ACTCAACACT
TCCAAATCAA CACCAAACAC CAGAGACAAA GCAAGTTTTT TAAATTTACC AGCCGAGAAT
CTGGTCTTGA TGGCTGTCAA ACCATCGGAA GACGACCAGC AGCAATTAAT TCTGCGCTTT
TATGAATCTC ATGGTGTGAC TACAGAATTA TCTTTGCAGA GCGATTTAAA GTTAACCTTG
GGTATTCCAG TAGATTTACT GGAACGCCCC ATTAGCCAAT TCTCATCTGG GCAACAAATC
TCCACAATTG AACCTTGGAA AATTGCGACT TTTAAAGTTT TAGAGGTCAG AGGCTAG
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| Protein sequence | MTPTESQYQT DLISDTIEKL RSCCQVNVQS TWLYQDSNTE ITGVATSSIS NWQPVELDTK
GNIAWTGGQQ VLWLEQKFVV PQNLHDYPLA GLSLRLSLLW WADSAKIYVN GQLVLEGDLF
DCSPRVLLSR EVSPGQEFVV ALRLASPGHC DGALVRSLLV YESTDYNYPD PGFIADELAI
LQLYLEKFAP EKLNILTQAI PEIHPSNPES LVTFRQNLIN HLSISDPKFK IYLLGHAHLD
LAWLWSVSET WNAAQNTFTS VLKLQQDFPE LIFCHSTPAL YAWIEEHRPD LFTAIQQAVA
AKKWEVIGGF WVEPDLNLIA GESIVRQLLY GQRYFQEKFG KLTTVVWVPD TFGFCATLPQ
FLANAGIEYF VTQKLRWNDT TKFDYGAFWW RSPDGSQVLS VMSATIGEGI DPIKMAAYSL
EWQTQTCLTQ SLWLPGVGDH GGGPTRDMLE TAQRWQTSPF FPDLEFITAE KYLQQIQSTV
NGQQSIVNSQ RSTFPIWNDE LYLEFHRGCY TTHADQKRWN RHSENLLYEA ELFATLATFI
CGVTYPKSDI ETAWKQVLFN QFHDILPGSS ITQVYTDALP EWQQVEQTGT KILKESLQAI
ASHFTLPEPP KTDSLPIFVF NSLNWQRSEV VSVTLPPPPP NQQWQVYDTT GKQIISQLTE
PSTILFLAED IPSVGYRLFW LSPTSPTSST SPTSSTSLDY ILENEHLRVI VDPDTGDLSS
IYDKTHQREV LSGAGNQLQA FKDSGQYWDA WNIDPNYSQH PLPATNLKSI QWLEQGTVQN
CLRVVRQLGK SEFCQDYILQ VGLPQLKIVS RVNWQEKHVL VKAAFPLNVT ADFATYEIPC
GAIRRPTQPQ TPQDKAKWEV PALRWADLTA ETDEGLYGVS LLNDCKYGYD SQPQLLRLTL
LRSPTWPDPE ADTGGIHEFA YTVYPHADSW ESAHTVQKGY ELNIPLQVIL NPTQHFQLNT
SKSTPNTRDK ASFLNLPAEN LVLMAVKPSE DDQQQLILRF YESHGVTTEL SLQSDLKLTL
GIPVDLLERP ISQFSSGQQI STIEPWKIAT FKVLEVRG
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