Gene PHATRDRAFT_52248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52248 
Symbol 
ID7202778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp60509 
End bp61027 
Gene Length519 bp 
Protein Length173 aa 
Translation table 
GC content53% 
IMG OID 
Productalpha mannosidase 
Protein accessionXP_002181835 
Protein GI219123029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAAT TGGTTCGGAC CTTGAGCTTT GACAATCCCG ATGGAGGCGT CTGGAAACAG 
GGATGGAACG TCACGGCACG GGACGACTTT ACCAACGCTC AGCCGCTACA GGTATTCGTC
GTCCCGCACT CCCACTGTGA TCCGGGATGG ATCAAGACCT TTGACGATTA CTTCCAATCG
CAGACTCGCC AAATCCTTAC CACCGTCGTC CAGGCTCTCC AACGAGACCA ACGCCGCAAA
TTCATCTGGG CCGAAATTTC CTACTTTGAA TGGTGGTACC GCGAACAAAA GGACGACACT
CGAAAAGTGG TCCAAACGCT CCTTGATAAT AAGCAGCTGC AATTCGTCAC GGGCGGATGG
GTACAACCGG ACGAGGCCAA TTCGGAATTA TACGCTATGG AAATTCAACT GCAGGAAGGG
CATGATTGGA TTCGACAAAC GTTCGGGGAC GCCCATGTCC CCAAACACGG ATGGTCCATT
GATCCCTTTG GCTATTCCCC CACTATGGCC TACCTTTTG
 
Protein sequence
MRQLVRTLSF DNPDGGVWKQ GWNVTARDDF TNAQPLQVFV VPHSHCDPGW IKTFDDYFQS 
QTRQILTTVV QALQRDQRRK FIWAEISYFE WWYREQKDDT RKVVQTLLDN KQLQFVTGGW
VQPDEANSEL YAMEIQLQEG HDWIRQTFGD AHVPKHGWSI DPFGYSPTMA YLL