Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_52248 |
Symbol | |
ID | 7202778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 60509 |
End bp | 61027 |
Gene Length | 519 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | alpha mannosidase |
Protein accession | XP_002181835 |
Protein GI | 219123029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAAT TGGTTCGGAC CTTGAGCTTT GACAATCCCG ATGGAGGCGT CTGGAAACAG GGATGGAACG TCACGGCACG GGACGACTTT ACCAACGCTC AGCCGCTACA GGTATTCGTC GTCCCGCACT CCCACTGTGA TCCGGGATGG ATCAAGACCT TTGACGATTA CTTCCAATCG CAGACTCGCC AAATCCTTAC CACCGTCGTC CAGGCTCTCC AACGAGACCA ACGCCGCAAA TTCATCTGGG CCGAAATTTC CTACTTTGAA TGGTGGTACC GCGAACAAAA GGACGACACT CGAAAAGTGG TCCAAACGCT CCTTGATAAT AAGCAGCTGC AATTCGTCAC GGGCGGATGG GTACAACCGG ACGAGGCCAA TTCGGAATTA TACGCTATGG AAATTCAACT GCAGGAAGGG CATGATTGGA TTCGACAAAC GTTCGGGGAC GCCCATGTCC CCAAACACGG ATGGTCCATT GATCCCTTTG GCTATTCCCC CACTATGGCC TACCTTTTG
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Protein sequence | MRQLVRTLSF DNPDGGVWKQ GWNVTARDDF TNAQPLQVFV VPHSHCDPGW IKTFDDYFQS QTRQILTTVV QALQRDQRRK FIWAEISYFE WWYREQKDDT RKVVQTLLDN KQLQFVTGGW VQPDEANSEL YAMEIQLQEG HDWIRQTFGD AHVPKHGWSI DPFGYSPTMA YLL
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