| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1084 |
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| Symbol | |
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| ID | 5704075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1218143 |
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| End bp | 1222339 |
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| Gene Length | 4197 bp |
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| Protein Length | 1398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641270599 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001535983 |
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| Protein GI | 159036730 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.503572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0341362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTCA TGATTTCCGC CGTCGAGTCC ACCGACTTGT TCGTCGGCAC CGAGGACAAC
CCGCGTCAGG TGCTCCGTGT GACGCTTGAC GGCCCGCCCG GGCCGGTCAC CGTCACCGGG
CCGGGTGTCT CCGGTAACGC GACCGGCACG GGCGTCGTCG AGGTCCCCCT GGACATCGAC
GACCGGACCC CCGGCACGGA GGTCCCGGTC ACCGTCACGG CCGGCGACAC GACCGTGGAG
ACCACGGTCG TGGTCGCCGA GCCGGGCTGG ACGATGTTCC TCGTCTCGCA CTTCCACTAC
GACCCGGTGT GGTGGAACAC ACAGGCCGCG TACACCTCGC CGTGGGAGTT GCTCTCCGGC
GACGCCACCA CCAGGCCGCT GTGGGAGCGC AACGGGTTCG CGCTGGTGGA CGCGCACATG
GACCTCGCCC TGCGCGACCC GGTGTACAAG TTCGTCCTCG CCGAGATCGA CTACCTCAAG
CCGTACTTCG ACCTGTATCC CGAGCGCCGG GCCGACCTTC GTCTGCTGCT CGAACGTGGC
CAGGTCGAGC TGATCGGCGG TACCTACAAC GAACCCAACA CCAACCTCAC CGGCGCCGAG
ACCACCATCC GCAACATCAT CTACGGCGTC GGCTACCAGC GTGACATCCT GGGCGGAGAC
CCGCAGACGG CATGGCAGCT GGACGTGTTC GGACATGACC CGCAGTTCCC GGGCTACCTC
GCCGACGCCG GGCTGACCGG GTCGGCGTGG GCGCGTGGCC CGTTCCACCA GTGGGGGCCG
ATCCAGAAGA ACTTCCGCGA GGCCAAGAAC GACGCGACGG TCATGCAGTT CCCGAGCGAG
TTCGAATGGA TCTCGCCGTC GGGTCTCGGC GTCCTCACCC ACTTCATGCC GCACCACTAC
TCGGCCGGCT GGTGGATGGA CTCCTCAGCC GACCTGCCCA GCGCCGAGAA GGCCGTCTAC
GAGCTGTACC AGCGCCTCAA GCCGGTCGGG GCGACGAAGA ACCTGCTGCT GCCCGTCGGC
ACCGACTACA CGCCGCCGAA CAAGTGGGTC ACCGAGATCC ACCGCTCGTG GGCGGCGAAG
TACGTCTGGC CCCGCTTCGT CTGCGGCACC CCCCGGGACT TCCTCGACGC CGTCCGCGCG
GAGATGGCCG CGACCGGGCG CCGCCCCAGC CCACAGACCC GGGACATGAA CCCGATCTAC
ACGGGCAAGG ACGTCTCCTA CATCGACACG AAGCAGGCGC AGCGGGCCGG GGAGGTCGCC
GCCGTCGACG CGGAGAAGCT GGCGACGCTG GCCGCGCTGG ACGGGCTCGG CAGGTATCCC
GACGCCGCAC TCGACAAGGT CTGGCGGCAG CTCGCCTACG GCGCACACCA CGACGCGATC
ACCGGGTCGG AGTCCGACCA GGTCTACATC GACCTGCTCT CCGGCTGGCG CGAGGCGTAC
GACCTGGCAG CCTCCGTACG GGACCGGGCG CTGGACGTGC TCATCGGTAC GGTCGACACC
ACCGGTGAGG GAACACCGGT CGTCGTCACG AACACGCTCT CCTTCGTTCG TTCCGATCTG
GTGTCGGTAC GACTTCCCGA CGGCCACGAA GGCGGACGGG TGATCGACGA CACCGGCGCC
GAGGTGCCGG CCGTCGTCGA CCGGGGAACG CTGCGGTTCC ACGCCGTCGA CGTTCCCGCC
ATGGGGTGGC GGACCTGGCG GCTGCTACCG GGTGCGTCCA GTGCCGAGCC GGCCTGGACA
CCCGCCGACG GTGCCGCGAT CGAGAACGCC TACTACCGGG TCACCGCCGA CGCCGAGCGC
GGCGGCGGAC TCGACAGCGT CTACGACAAG GTCTCGGACC GCGAACTGAT CCGCGCCGAG
CACCTCGGCA ACGAGCTGCG GATCTACGAG GAGTACCCGG CCCACCCGGA CTTCGGTGAG
GGCCCGTGGC ACCTCATCCC GAAGGGGCCG GTCGTGGGCA GCGCGGCGGC GGCAGCCACG
GTCCGGGCCG AGACGAGCCC GATCGGCGCC CGCCTGGTGG TTTCCGGCAC CGTCGACGGA
ATCGGCTACG AGCAGACCAT CACGCTGTGG CACGGTGTGC GCCGGGTGGA CTGCCGGACC
CGCATCGTCG ACTACGCCGG CGCCGACCGG CTGGTGCGGG TGCGCTTCCC GGTCGACCTG
CCCGGCGCGC TGCCGGTTTC CGAGGTTGCC GCCGCCGTGG TCGGCCGTGG GTTCGCGCTC
CCGGACGTCG ACGCGGCGGA AGCCCCCTGG ACGCTGGACA ACCCGGCCAA CACCTGGTTC
GGACTCGGTT CCACGGCTCG GGTCTCGCTC TCCGACGCCG CCGGTTCGCC GCTGGGCGAC
CGCGCCCTCG GTGTCGCCGA GGTGGTGACG CCCACGCTCG GTGAGGCGGC CGACGCCCGC
GATCTCGTCG TCGCGCTCGC CGCCGTCGGT GTCACCGCGA CGACCGCCAG CGCCGACTGG
GCGCGGTACG GCTGGCTCGA CGTCGACTCG AACCTGCCCG ACTTCCGCAT TCTCGTCGGG
GGGCCGCAGA CCAACGACGC CACCCGGGAA CTGCTGGAGC GGGCGGGCCC GGAATATGTC
GACGCGCTGA AGCGGCACGG CCGGGTGTGG GTTCCCGCGG AGAAGCCGCT GCACGAGGTG
TGGCAGCCCA ACGCCGACCT ACGGGACCTG CGGATGCTGC CGGCGCTCGT GGTGACCGAC
GTCGCCTCGC TGACCGAGGA CGTCGCCGAC GCCCGGATCC AGGCATGCTG CCCCGGTGCG
GTTCCGGCGT CGGAGCTGCT GTCCGACCAC ACCGTCGCGA TGCTCACCTA CGGGCTGCCC
GGATTCGCGG TCGACCCGAC CGGAGCGATG CACCTGTCGC TGATGCGCTC GTGCACCGGC
TGGCCGTCCG GGGTGTGGAT CGACCCGCCG AAGCGGACTC TGCCCGACGG CGCGTCGTTC
CAGCTGCAGC ACTGGACCCA TGAGTTCAAC TACGCGCTGA CCAGCGGAGA CGGCGACTGG
CGGGAGCTCA CGCTGCCCGC ACAGGGCCAG GAGTTCAACC ACCCGCTGTA CGGCCGGGTT
GCCGAGAACC ATGCGGGGAC GAAGCCAGCG ACGCACTCGT ACCTGGCGGT GGAGCCCGCG
CGGGAGGTGC TGCTCGGGAC GCTCAAGCCC ACCGGAAACC CGATCGCGCA CGGCACCGCC
GTGTCCTCGG ACCCGGCGGA CGGGGTCAGT CTGCGGCTGC TCGAGTCGAC CGGGCTCGGC
CGTTCCGCGA CGCTGACCGG CGCGCTGGCG CTGGCCGACA AGCACCAGGC CGACCTGATG
GAACGTCCTG GTGACGCGCT CCCGGACGCG ATTGGGTTGG CCGGCTCGCA GGTCACCACG
GTCATCGGTC GACCGGTAGC GGCCCGGCGT GGTGAGGAAC CGCTCGGGCC CGAGGTCGAG
ATCGCCCAGC CGGTGCACTC CCGGTACTGG TTGCACAACC GGGGCCCGGC GCCGATGGGC
TACCTACCGG TCTCCGTGGG TGTCTCACCC GGGCTGCTGC AGACCGTCGG CGAGCCGGTG
GAGGTCTCGG TGGTGCTCGC CTCGCACCTG CGCGACGCTG CGGTCGAGGG GACGGTCAGT
GTCCTCGTCC CAGAAGGGTG GACGGCCTCC CTGGGCAGCC GTCCGTACCG GCTCGACCCC
GATGGTCAGC TTCGCTTCGC CGTCACCGTG ACACCGCCTG TCGGGGTGGA GTCCGGGCTG
TACTTCGTCG CCGCCCGGAC CGAACACCTC GGGCAGACGA TCGAGGACGT CACCACCGTC
GCCGTCGGTG AACTTCCTGA TCTGCTGCCC GTGCCCGGGG ACATCCCGGA GGACTGGGAC
GCGGCGCAGG GCACGACGGC CGAGTCGGGA CGCGACACCG GGCTCACCGT GGATGTCACC
ACCACCTCGG TCACCGTCAC CCCCGGGGGC CGGGCAACCG TCGGGGTGTG CCTGCATAAC
CGCACCCGTG GTGAGATCCG GGCTGAACTC CAGCTTGTCT CACCCTGGGG CACCTGGGAC
GCCATCGCCG AGCCGATCCG CGGCGTCGCG TTGCCCGCGG GTGGATCCGA GACGGTCACC
TTCGACGTCG TTCCCCCGCG TGATGCCGAT CCGGGCCGGT TCTGGGCGCT GGTCAAGGTG
ATGTGGTTCG GGCGGTGCCA GTACGCCCCG ACCGTCGAGC TGGTGCTGGA ACCGTGA
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| Protein sequence | MSVMISAVES TDLFVGTEDN PRQVLRVTLD GPPGPVTVTG PGVSGNATGT GVVEVPLDID
DRTPGTEVPV TVTAGDTTVE TTVVVAEPGW TMFLVSHFHY DPVWWNTQAA YTSPWELLSG
DATTRPLWER NGFALVDAHM DLALRDPVYK FVLAEIDYLK PYFDLYPERR ADLRLLLERG
QVELIGGTYN EPNTNLTGAE TTIRNIIYGV GYQRDILGGD PQTAWQLDVF GHDPQFPGYL
ADAGLTGSAW ARGPFHQWGP IQKNFREAKN DATVMQFPSE FEWISPSGLG VLTHFMPHHY
SAGWWMDSSA DLPSAEKAVY ELYQRLKPVG ATKNLLLPVG TDYTPPNKWV TEIHRSWAAK
YVWPRFVCGT PRDFLDAVRA EMAATGRRPS PQTRDMNPIY TGKDVSYIDT KQAQRAGEVA
AVDAEKLATL AALDGLGRYP DAALDKVWRQ LAYGAHHDAI TGSESDQVYI DLLSGWREAY
DLAASVRDRA LDVLIGTVDT TGEGTPVVVT NTLSFVRSDL VSVRLPDGHE GGRVIDDTGA
EVPAVVDRGT LRFHAVDVPA MGWRTWRLLP GASSAEPAWT PADGAAIENA YYRVTADAER
GGGLDSVYDK VSDRELIRAE HLGNELRIYE EYPAHPDFGE GPWHLIPKGP VVGSAAAAAT
VRAETSPIGA RLVVSGTVDG IGYEQTITLW HGVRRVDCRT RIVDYAGADR LVRVRFPVDL
PGALPVSEVA AAVVGRGFAL PDVDAAEAPW TLDNPANTWF GLGSTARVSL SDAAGSPLGD
RALGVAEVVT PTLGEAADAR DLVVALAAVG VTATTASADW ARYGWLDVDS NLPDFRILVG
GPQTNDATRE LLERAGPEYV DALKRHGRVW VPAEKPLHEV WQPNADLRDL RMLPALVVTD
VASLTEDVAD ARIQACCPGA VPASELLSDH TVAMLTYGLP GFAVDPTGAM HLSLMRSCTG
WPSGVWIDPP KRTLPDGASF QLQHWTHEFN YALTSGDGDW RELTLPAQGQ EFNHPLYGRV
AENHAGTKPA THSYLAVEPA REVLLGTLKP TGNPIAHGTA VSSDPADGVS LRLLESTGLG
RSATLTGALA LADKHQADLM ERPGDALPDA IGLAGSQVTT VIGRPVAARR GEEPLGPEVE
IAQPVHSRYW LHNRGPAPMG YLPVSVGVSP GLLQTVGEPV EVSVVLASHL RDAAVEGTVS
VLVPEGWTAS LGSRPYRLDP DGQLRFAVTV TPPVGVESGL YFVAARTEHL GQTIEDVTTV
AVGELPDLLP VPGDIPEDWD AAQGTTAESG RDTGLTVDVT TTSVTVTPGG RATVGVCLHN
RTRGEIRAEL QLVSPWGTWD AIAEPIRGVA LPAGGSETVT FDVVPPRDAD PGRFWALVKV
MWFGRCQYAP TVELVLEP
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