12 homologs were found in PanDaTox collection
for query gene Oter_3588 on replicon NC_010571
Organism: Opitutus terrae PB90-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_3588  hypothetical protein  100 
 
 
259 aa  520  1e-146  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0475559 
 
 
-
 
NC_010581  Bind_1101  hypothetical protein  34.1 
 
 
309 aa  82  0.000000000000009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.937907 
 
 
-
 
NC_007520  Tcr_1323  hypothetical protein  26.92 
 
 
253 aa  69.7  0.00000000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1740  hypothetical protein  30.41 
 
 
282 aa  68.9  0.00000000007  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00156192 
 
 
-
 
NC_007958  RPD_3650  hypothetical protein  28.31 
 
 
323 aa  64.7  0.000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1059  hypothetical protein  25.67 
 
 
263 aa  56.6  0.0000004  Chlorobium limicola DSM 245  Bacteria  normal  0.269022  n/a   
 
 
-
 
NC_010803  Clim_2004  hypothetical protein  29.05 
 
 
266 aa  56.6  0.0000004  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00153621  n/a   
 
 
-
 
NC_010581  Bind_1682  hypothetical protein  28.57 
 
 
305 aa  54.7  0.000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.450349 
 
 
-
 
NC_010831  Cphamn1_0352  hypothetical protein  32.35 
 
 
248 aa  54.3  0.000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0487  hypothetical protein  29.45 
 
 
263 aa  51.6  0.00001  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.38522  n/a   
 
 
-
 
NC_011059  Paes_0325  hypothetical protein  27.5 
 
 
259 aa  49.7  0.00005  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.391296  normal  0.511611 
 
 
-
 
NC_010717  PXO_02098  hypothetical protein  25.81 
 
 
367 aa  49.3  0.00007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>