Gene Oter_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3588 
Symbol 
ID6205529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4670635 
End bp4671414 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID641693256 
Producthypothetical protein 
Protein accessionYP_001820465 
Protein GI182415399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0475559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC TGGTGCGTCT CCGCTGGGTG ATTACCGGAT TGCTCCTCGG GGCATTCGCG 
CAGCCGCTCG CCGCGCAGGT GACGGAATCG CCGGAGACGG TCGCGCCGGG CCGGTTCCTG
GTGGAAATGG ACGGGCTGAC ACTGGCGATG GGGCGGGCGG AGGAGGCCCG CAACACCTAC
ACGGCGACGG CGATTGCCTC GACGCTCGTG TCCACCGGGC TGACCTCGAG CGTGGATATC
CAGGTCGGGT TTGATCTTTT TTACCGGTAC AAGTTGAAAT ACCAGGGTGG CAGCGATTCG
ACGTCCGGGT TGGGAGACCT GTCGTTTCGC ACCAAATGGA CCTTCTGGCG GAATGCCGAA
TGGGGCGCCG CCGCCGCGAT CATTCCCTAT GTGAAATTGC CGACGAGCCG CGACGGACTG
GGCACGGATG CGGTGGAAGG CGGGATCATT GTGCCGTGGG CGATGGATCT GGGCGCCGGC
GTCACGGCCG GAGCGATGGC TTCGTGGGAT CTCGTGCGCA ACGACGCCGA CAACGGCTAC
GATTCGCACT GGCTCACGAG CGCCTACATT GGACGGCCGC TGCCGTTCGG CATCACGCTT
TACGGCGAGG CGTTGCTCGA GGCGAACTCG GCGAAATTCT CGGACTGGGC GGGGCAGATT
GGCGGCGGCG CGCTCTGGCA GTGGAGCGAG CAGCTGCAGT TCGACTACCA GCTGCTGCGC
GGGCTCAATT CGCGCGCGTC GGACTGGACG CACGTGTTCC GCGTGAACTG GGGCTGGTAG
 
Protein sequence
MNLLVRLRWV ITGLLLGAFA QPLAAQVTES PETVAPGRFL VEMDGLTLAM GRAEEARNTY 
TATAIASTLV STGLTSSVDI QVGFDLFYRY KLKYQGGSDS TSGLGDLSFR TKWTFWRNAE
WGAAAAIIPY VKLPTSRDGL GTDAVEGGII VPWAMDLGAG VTAGAMASWD LVRNDADNGY
DSHWLTSAYI GRPLPFGITL YGEALLEANS AKFSDWAGQI GGGALWQWSE QLQFDYQLLR
GLNSRASDWT HVFRVNWGW