Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1740 |
Symbol | |
ID | 8252842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2052898 |
End bp | 2053746 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644935391 |
Product | hypothetical protein |
Protein accession | YP_003092012 |
Protein GI | 255531640 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00156192 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATGAAAG ACAGCTTCGT TAAAATTTTT ATTTTATTTT CATACGGGTT CAGCCTGTCC TTGAGTGCGA ATGCACAAAA GCATGCTGTC AGGTATTCAT TGTTTCATCC GGTGCCCGCC AGTCAACTTC GCGACATGGA GACTGACCGG CCAGATGTGA CGGAATCACC TTTTACGGTA AATGCCGGGC ATTTTCAGTA TGAGACGGAT CTTTTCAGGA TAGTTAGGGA AAAATCAGAC ATGAGCAAAA CCAGTACTTT GCTGATCAAC CAGGCTAACC TGAAAATCGG GCTTACCGAA TCTACTGCGC TTCAGGTTGG TTTTCAGAGT TATGGCGAAA TGCGGCAGAA GGATCTGGCT TCAGGAAAAA AAACGCATAC CCATGGTATT GGTGATCTGA CTGTGCGTGT GAAGCAGAAT CTGTTTGGAA ATAATGGCGG GAATTTCGCA CTGGCGCTGT TGCCTTATGT GAAGTTTCCG ACTTCTGAGT ATGACAGTGA AGGTAGGTTT GAGTATGGGC TGATCCTGCC GATGCAATTT AAGCTGCCGG GGGAATGGAA ACTGGGTTTG CAGCTCGAGA CTGACCGGTT GAAGGACCAG GACCAGCAGG CAATGCATAC CGAGTTATTA CAGTCGGTAA CGGTTGCGCA TGCGCTGGTA AAGAAACTCG ACGGCATCGC AGAGACTTAT TATACCTATG ATTTTAAAGC GCAGCAGTGG TCGAACTTTT TAAACGCGGC TTTACAGCTG GAGTTGGCTA AAAATGTGAA ACTGGATGCA GGTTTTAATT ATGGGATTCA ACATCAGGCA GCCAGGCATT ATTTTCTTGG GGCCGCCTGT AGGTTTTAA
|
Protein sequence | MMKDSFVKIF ILFSYGFSLS LSANAQKHAV RYSLFHPVPA SQLRDMETDR PDVTESPFTV NAGHFQYETD LFRIVREKSD MSKTSTLLIN QANLKIGLTE STALQVGFQS YGEMRQKDLA SGKKTHTHGI GDLTVRVKQN LFGNNGGNFA LALLPYVKFP TSEYDSEGRF EYGLILPMQF KLPGEWKLGL QLETDRLKDQ DQQAMHTELL QSVTVAHALV KKLDGIAETY YTYDFKAQQW SNFLNAALQL ELAKNVKLDA GFNYGIQHQA ARHYFLGAAC RF
|
| |