Gene Phep_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1740 
Symbol 
ID8252842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2052898 
End bp2053746 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID644935391 
Producthypothetical protein 
Protein accessionYP_003092012 
Protein GI255531640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00156192 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAAAG ACAGCTTCGT TAAAATTTTT ATTTTATTTT CATACGGGTT CAGCCTGTCC 
TTGAGTGCGA ATGCACAAAA GCATGCTGTC AGGTATTCAT TGTTTCATCC GGTGCCCGCC
AGTCAACTTC GCGACATGGA GACTGACCGG CCAGATGTGA CGGAATCACC TTTTACGGTA
AATGCCGGGC ATTTTCAGTA TGAGACGGAT CTTTTCAGGA TAGTTAGGGA AAAATCAGAC
ATGAGCAAAA CCAGTACTTT GCTGATCAAC CAGGCTAACC TGAAAATCGG GCTTACCGAA
TCTACTGCGC TTCAGGTTGG TTTTCAGAGT TATGGCGAAA TGCGGCAGAA GGATCTGGCT
TCAGGAAAAA AAACGCATAC CCATGGTATT GGTGATCTGA CTGTGCGTGT GAAGCAGAAT
CTGTTTGGAA ATAATGGCGG GAATTTCGCA CTGGCGCTGT TGCCTTATGT GAAGTTTCCG
ACTTCTGAGT ATGACAGTGA AGGTAGGTTT GAGTATGGGC TGATCCTGCC GATGCAATTT
AAGCTGCCGG GGGAATGGAA ACTGGGTTTG CAGCTCGAGA CTGACCGGTT GAAGGACCAG
GACCAGCAGG CAATGCATAC CGAGTTATTA CAGTCGGTAA CGGTTGCGCA TGCGCTGGTA
AAGAAACTCG ACGGCATCGC AGAGACTTAT TATACCTATG ATTTTAAAGC GCAGCAGTGG
TCGAACTTTT TAAACGCGGC TTTACAGCTG GAGTTGGCTA AAAATGTGAA ACTGGATGCA
GGTTTTAATT ATGGGATTCA ACATCAGGCA GCCAGGCATT ATTTTCTTGG GGCCGCCTGT
AGGTTTTAA
 
Protein sequence
MMKDSFVKIF ILFSYGFSLS LSANAQKHAV RYSLFHPVPA SQLRDMETDR PDVTESPFTV 
NAGHFQYETD LFRIVREKSD MSKTSTLLIN QANLKIGLTE STALQVGFQS YGEMRQKDLA
SGKKTHTHGI GDLTVRVKQN LFGNNGGNFA LALLPYVKFP TSEYDSEGRF EYGLILPMQF
KLPGEWKLGL QLETDRLKDQ DQQAMHTELL QSVTVAHALV KKLDGIAETY YTYDFKAQQW
SNFLNAALQL ELAKNVKLDA GFNYGIQHQA ARHYFLGAAC RF