Gene RPD_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3650 
Symbol 
ID4024164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4074626 
End bp4075597 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content58% 
IMG OID637963854 
Producthypothetical protein 
Protein accessionYP_570774 
Protein GI91978115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTGC AAATGACTTG CAAAAGCATT TTCACATTTC GGCGGAGGAG CGGATGTATT 
GATCGCGCCC TTGATGCCCG CGCGGGTGGC CGACCGCTGA CGCATCAGCT TCGTGCATGG
GGTGTTGGGT TCGCGGTGGT GTCGTCGTTG TTCCTGAATG CGACGGTGAC CCGCGCGGAT
GACAAGCGTT CCTATTCGCT GTTCAACCCG ACACCGGATC GGCTGCTCCG CGATATGACG
ACTGATCGCC CGGATATTAC CGAGGTGCCA TTCACGGTGG ATGCCGGACG CGTGCAGATC
GAATCGACGA TGTACGGCCT GGTGCGATCG CGGCCTGACA ACCAAGGATC GGTCACCCAG
GGATACGAAC TGGCCGGAAG CAACATCCGA ATCGGACTGA CACACGACAC CGAAGCGACC
GTGATGTTTC AGCCTTATGC CAGCCAGAGA ATTTCCGGGC CGCACGACAC GGTTCACAAC
TCAGGCATTG GCGCATTGGT CCTCCGCGCT AAATTCAATC TCTGGGGCAA CGACACTTTC
TCGGACCCGG GGTCGACCGC GTTTGCGCTT TTGCCTTACG TGTCCCTGCC TACCGATCGT
CTCAACGGTA TTAGCCCAGA GGGGATCGAC GGCGGCCTGA TGTCATTCTT CATCGTCAAG
CTGGGCGCCG GTTTCTCACT GGGCATCAAT GCCGGTGTTC ATTCTGTCCA GGACATCGAG
ACGACCGGAC GTCACTTCGA GACCTCGGGA TCGGCTTCGC TGGGCTACGA ATGGTCGGAA
AAACTCACAA CCTACCTTGA GGTCGCTACG AGGTTGGCAA CGCGGGACCC GCTGGGCGAT
ATCGGTATCT TGGGCGGCGG TGTAAGCTAC AAAATCACGT CGAATTTCCA GCTCGATGCT
GGCGTCAATT TCGGCGTGAC CCAGGCTTCG TACAGTGTCG CTCCATTCGT CGGCGTAACC
GCGAGGTTCT GA
 
Protein sequence
MFLQMTCKSI FTFRRRSGCI DRALDARAGG RPLTHQLRAW GVGFAVVSSL FLNATVTRAD 
DKRSYSLFNP TPDRLLRDMT TDRPDITEVP FTVDAGRVQI ESTMYGLVRS RPDNQGSVTQ
GYELAGSNIR IGLTHDTEAT VMFQPYASQR ISGPHDTVHN SGIGALVLRA KFNLWGNDTF
SDPGSTAFAL LPYVSLPTDR LNGISPEGID GGLMSFFIVK LGAGFSLGIN AGVHSVQDIE
TTGRHFETSG SASLGYEWSE KLTTYLEVAT RLATRDPLGD IGILGGGVSY KITSNFQLDA
GVNFGVTQAS YSVAPFVGVT ARF