8 homologs were found in PanDaTox collection
for query gene Noca_3737 on replicon NC_008699
Organism: Nocardioides sp. JS614



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_3737  hypothetical protein  100 
 
 
163 aa  321  2e-87  Nocardioides sp. JS614  Bacteria  normal  0.0596128  n/a   
 
 
-
 
NC_009921  Franean1_6683  TetR family transcriptional regulator  39.62 
 
 
207 aa  84.3  6e-16  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4496  hypothetical protein  28.1 
 
 
203 aa  57.4  0.00000009  Ralstonia eutropha JMP134  Bacteria  normal  0.621109  n/a   
 
 
-
 
NC_007974  Rmet_5057  TetR family transcriptional regulator  27.13 
 
 
214 aa  48.1  0.00005  Cupriavidus metallidurans CH34  Bacteria  normal  0.389199  normal 
 
 
-
 
NC_013947  Snas_2431  transcriptional regulator, TetR family  27.82 
 
 
198 aa  45.4  0.0003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.324366  normal 
 
 
-
 
NC_011365  Gdia_1470  putative transcriptional regulator, TetR family  27.7 
 
 
192 aa  43.1  0.001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.596057  normal  0.840694 
 
 
-
 
NC_014212  Mesil_2069  transcriptional regulator, TetR family  28.86 
 
 
191 aa  41.6  0.005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3831  transcriptional regulator, TetR family  28.06 
 
 
208 aa  40.8  0.009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.484216  normal  0.0261757 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>