6 homologs were found in PanDaTox collection
for query gene Namu_4456 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_4456  polysaccharide biosynthesis protein  100 
 
 
458 aa  885    Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0311  polysaccharide biosynthesis protein  23.32 
 
 
418 aa  74.3  0.000000000004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.673346  n/a   
 
 
-
 
NC_009675  Anae109_1814  polysaccharide biosynthesis protein  23.47 
 
 
468 aa  52  0.00002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_2971  O antigen flippase  21.43 
 
 
461 aa  50.1  0.00008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.436606  hitchhiker  0.000000132287 
 
 
-
 
NC_010465  YPK_3186  LPS side chain defect: putative O-antigen transferase  21.32 
 
 
435 aa  44.3  0.005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.15241  n/a   
 
 
-
 
NC_011205  SeD_A2427  putative O-antigen transporter  22.4 
 
 
427 aa  43.1  0.01  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.279606  hitchhiker  0.000454993 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>