| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4456 |
|---|
| Symbol | |
|---|
| ID | 8450083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4944459 |
|---|
| End bp | 4945835 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645043503 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003203731 |
|---|
| Protein GI | 258654575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ATCCGGTCGC GCCGGCCGCC CCGCCCAGCT TGTGGCGCAG CGTCGGTTCG
ACGGCGATCA TGAAGGTCCT CGTGATGGGG ACGTCCGGGG TTCTCGGCAT CCTGACCAGC
CGCATGATCC TGTCGCACTT CGGTATCGAC GCCTACGCCC AGTACGGCCT GCTGGCCAGC
CTGCCCGCCC TGCTGCCCTT CGCCGACCTG GGCATCGCTG CCGTGGTCTT CAACGTGATT
GCCGGCTCGG CCGACCCGCG AACCGACGAC ACCGTCCACC GGACGATCGT GACGGCCTTC
CGTATTCTCT TGATCTCCGG GCCGGTGATC ATCGCCGTCG CCGTCGTCAT CTCGCTGTTG
CAGCTGTGGC CGGCGCTGCT CGGCCAGGGT CTGATGCCTG ACGGGGGCAG CACTGTACTG
ATCTGTGCGG TGATTTTCGG CTGCGGGCTG CCGTTGACAG TCGGTCAACG GATCCTGGTC
GGACTCGGCC GGAACGGCAC ACAGGTCGCC GCCCAGGCGG TGGTGGCACC CTTCATCTTC
CTGTGCGTCC TGGTCGCTGT CTGGCTGGGC TTGCCCGTTG GCAACGACCT CGCGGTACTG
TCCTACGTCG GCGCGGCCCT GGTGTCGATC ATTTGCTTGG TCATCTCCGG TCGCTTGATC
TCGCCGATGC TGACCCGATC CATCCGGGAT ATCCCGCGGA TCCGGGCCGT CCCCAAACTC
CCGGTGATCG CCGTGGTCGG CCCGATGCTC GTGCAGATGA TCATCCTTCC GGTGGCCACC
CAGATGGATC GGATTCTGCT GAGCAACTTC GCCGGTTCCG ATGATCTGGC GCAGTACAAC
CTCGGGTCGC AACTGTTCGG CATCGCTCTG CAGACGATCT CGGCGGCCGG GTTGGCCTTG
TGGCCCATCT ACGCCAAAGC CAGGTCGTCC GACCACATCC GATCGCCGCT GCGTCCGTCC
GCCATGTTCA TGGTCGGTGG CCTGGTGATC GCCGTGATCA TGGCGCTGTT GTCACCATTG
CTGGTGCGTT TCGTCTCGAG TGGTCAGTTG CACCTAGGGC TGAGCCTGGT GTTGGCGTTC
GTCGTCCTGG TCAGCGTGCA AGCGGCCAAA TACCCGCTGG GCATGTACAT GACGGATGAA
CGGGGTCTGC GATTTCAGGT GATACCGATC ATGATCCTCC TGCCGTTGAA CATCGGATTG
TCGATCGTCC TGATCAGATG GATTGGCGCA GCCGGCCCAG TCTGGGCCGG GGCAACGTCG
GCGCTGCTCT GCCAGGTGCT GCCGAACCTC TGGTATGTCA CGAAGGACCT GAACCGTCGA
AGGGCCGCCG CCCGGGCTGG GACGGCGGGC ACGGCGCCGT CCGAATTACT CGAGTGA
|
|---|
| Protein sequence | MTADPVAPAA PPSLWRSVGS TAIMKVLVMG TSGVLGILTS RMILSHFGID AYAQYGLLAS
LPALLPFADL GIAAVVFNVI AGSADPRTDD TVHRTIVTAF RILLISGPVI IAVAVVISLL
QLWPALLGQG LMPDGGSTVL ICAVIFGCGL PLTVGQRILV GLGRNGTQVA AQAVVAPFIF
LCVLVAVWLG LPVGNDLAVL SYVGAALVSI ICLVISGRLI SPMLTRSIRD IPRIRAVPKL
PVIAVVGPML VQMIILPVAT QMDRILLSNF AGSDDLAQYN LGSQLFGIAL QTISAAGLAL
WPIYAKARSS DHIRSPLRPS AMFMVGGLVI AVIMALLSPL LVRFVSSGQL HLGLSLVLAF
VVLVSVQAAK YPLGMYMTDE RGLRFQVIPI MILLPLNIGL SIVLIRWIGA AGPVWAGATS
ALLCQVLPNL WYVTKDLNRR RAAARAGTAG TAPSELLE
|
|---|
| |