12 homologs were found in PanDaTox collection
for query gene YPK_3186 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_3186  LPS side chain defect: putative O-antigen transferase  100 
 
 		 435 aa  858    Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.15241  n/a   
 
 
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NC_011149  SeAg_B2213  putative O-antigen transporter  39.91 
 
 		 430 aa  315  9e-85  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.163882  n/a   
 
 
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NC_011083  SeHA_C2314  putative O-antigen transporter  39.91 
 
 		 426 aa  315  9.999999999999999e-85  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.0335708 
 
 
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NC_011094  SeSA_A2321  putative O-antigen transporter  39.81 
 
 		 426 aa  312  5.999999999999999e-84  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0603153  normal  0.0137212 
 
 
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NC_011205  SeD_A2427  putative O-antigen transporter  39.34 
 
 		 427 aa  302  7.000000000000001e-81  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.279606  hitchhiker  0.000454993 
 
 
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NC_009483  Gura_3785  polysaccharide biosynthesis protein  35.63 
 
 		 442 aa  269  8.999999999999999e-71  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_013216  Dtox_2844  polysaccharide biosynthesis protein  23.06 
 
 		 457 aa  72.4  0.00000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
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NC_009675  Anae109_1814  polysaccharide biosynthesis protein  19.95 
 
 		 468 aa  64.7  0.000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
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NC_013037  Dfer_4598  polysaccharide biosynthesis protein  21.88 
 
 		 448 aa  63.5  0.000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
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NC_009379  Pnuc_0311  polysaccharide biosynthesis protein  22.12 
 
 		 418 aa  63.5  0.000000008  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.673346  n/a   
 
 
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NC_008709  Ping_0778  polysaccharide biosynthesis protein  21.01 
 
 		 442 aa  48.5  0.0003  Psychromonas ingrahamii 37  Bacteria  normal  0.699251  normal  0.0159711 
 
 
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NC_011145  AnaeK_3155  polysaccharide biosynthesis protein  18.46 
 
 		 457 aa  47  0.0007  Anaeromyxobacter sp. K  Bacteria  normal  0.910859  n/a   
 
 
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