Gene SeHA_C2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2314 
Symbol 
ID6491759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2216244 
End bp2217524 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content31% 
IMG OID642742503 
Productputative O-antigen transporter 
Protein accessionYP_002046138 
Protein GI194449592 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0335708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAAAAA TTCCGAGTCA TTTAATTGTT GCAGGTTCAT CATGGTTATC CAAAATAATA 
ATTGCCGGGG TGCAGTTAGC AAGTATTTCA TATCTTATTT CTATACTAGG TGAAGAGAAA
TATGCAATCT TTAGTTTGTT AACTGGTTTA TTAGTATGGT GTAGCGCTGT TGATTTTGGC
ATAGGTACAG GACTGCAAAA TTATATATCA GAATGCAGAG CCAAAAACAA AAGTTATGAT
GCATATATTA AATCAGCATT ACATCTAAGC TTTATAGCTA TTATTTTTTT TATTGCTTTA
TTTTATATTT TTTCTGGGGT AATTTCCGCT AAATATCTTT CTTCTTTTCA TGAGGTATTA
CAGGACAAAA CCAGAATGCT CTTTTTTACC TCATGTCTGG TTTTCAGTTC TATTGGAATC
GGAGCTATTG CTTATAAAAT ACTTTTTGCC GAATTGGTCG GGTGGAAAGC TAATCTATTA
AACGCATTAT CTTATATGAT AGGTATGCTC GGCTTGCTAT ATATATACTA TAGGGGGATC
TCAGTTGACA TAAAATTATC ACTAATAGTC CTGTATCTTC CAGTGGGTAT GATTTCATTG
TGCTATATTG TATATAGATA CATAAAGCTT TATCATGTTA AAACAACAAA ATCTCATTAT
ATAGCAATTT TACGTAGATC TTCAGGGTTT TTTCTTTTTA CTTTATTATC GATAGTGGTG
CTTCAAACAG ATTATATGGT CATTTCTCAA AGGCTAACTC CTGCTGATAT TGTTCAATAT
ACAGTAACGA TGAAAATTTT TGGTTTAGTC TTTTTTATTT ATACTGCTAT TTTGCAAGCA
TTATGGCCTA TATGTGCTGA ATTGAGAGTC AAACAGCAAT GGAAAAAACT TAACAAAATG
ATAGGTGTCA ATATTTTGCT TGGCTCACTA TATGTTGTTG GATGTACAAT ATTTATTTAT
TTATTTAAAG AACAGATATT TTCAGTAATA GCCAAAGATA TTAATTATCA AGTTTCTATT
TTATCTTTTA TGTTAATTGG CATATATTTC TGTATTCGCG TTTGGTGTGA CACTTATGCA
ATGTTATTGC AAAGTATGAA TTATTTAAAA ATACTTTGGA TATTAGTACC ACTACAAGCA
ATAATTGGTG GAATAGCACA ATGGTATTTT TCTAGTACGC TTGGAATCAG TGGAGTGCTG
CTTGGCTTGA TTATATCTTT TGCTTTAACT GTTTTTTGGG GGCTTCCACT AACTTACTTA
ATTAAGGCAA ATAAGGGATA A
 
Protein sequence
MLKIPSHLIV AGSSWLSKII IAGVQLASIS YLISILGEEK YAIFSLLTGL LVWCSAVDFG 
IGTGLQNYIS ECRAKNKSYD AYIKSALHLS FIAIIFFIAL FYIFSGVISA KYLSSFHEVL
QDKTRMLFFT SCLVFSSIGI GAIAYKILFA ELVGWKANLL NALSYMIGML GLLYIYYRGI
SVDIKLSLIV LYLPVGMISL CYIVYRYIKL YHVKTTKSHY IAILRRSSGF FLFTLLSIVV
LQTDYMVISQ RLTPADIVQY TVTMKIFGLV FFIYTAILQA LWPICAELRV KQQWKKLNKM
IGVNILLGSL YVVGCTIFIY LFKEQIFSVI AKDINYQVSI LSFMLIGIYF CIRVWCDTYA
MLLQSMNYLK ILWILVPLQA IIGGIAQWYF SSTLGISGVL LGLIISFALT VFWGLPLTYL
IKANKG