Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2314 |
Symbol | |
ID | 6491759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2216244 |
End bp | 2217524 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642742503 |
Product | putative O-antigen transporter |
Protein accession | YP_002046138 |
Protein GI | 194449592 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.0335708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTAAAAA TTCCGAGTCA TTTAATTGTT GCAGGTTCAT CATGGTTATC CAAAATAATA ATTGCCGGGG TGCAGTTAGC AAGTATTTCA TATCTTATTT CTATACTAGG TGAAGAGAAA TATGCAATCT TTAGTTTGTT AACTGGTTTA TTAGTATGGT GTAGCGCTGT TGATTTTGGC ATAGGTACAG GACTGCAAAA TTATATATCA GAATGCAGAG CCAAAAACAA AAGTTATGAT GCATATATTA AATCAGCATT ACATCTAAGC TTTATAGCTA TTATTTTTTT TATTGCTTTA TTTTATATTT TTTCTGGGGT AATTTCCGCT AAATATCTTT CTTCTTTTCA TGAGGTATTA CAGGACAAAA CCAGAATGCT CTTTTTTACC TCATGTCTGG TTTTCAGTTC TATTGGAATC GGAGCTATTG CTTATAAAAT ACTTTTTGCC GAATTGGTCG GGTGGAAAGC TAATCTATTA AACGCATTAT CTTATATGAT AGGTATGCTC GGCTTGCTAT ATATATACTA TAGGGGGATC TCAGTTGACA TAAAATTATC ACTAATAGTC CTGTATCTTC CAGTGGGTAT GATTTCATTG TGCTATATTG TATATAGATA CATAAAGCTT TATCATGTTA AAACAACAAA ATCTCATTAT ATAGCAATTT TACGTAGATC TTCAGGGTTT TTTCTTTTTA CTTTATTATC GATAGTGGTG CTTCAAACAG ATTATATGGT CATTTCTCAA AGGCTAACTC CTGCTGATAT TGTTCAATAT ACAGTAACGA TGAAAATTTT TGGTTTAGTC TTTTTTATTT ATACTGCTAT TTTGCAAGCA TTATGGCCTA TATGTGCTGA ATTGAGAGTC AAACAGCAAT GGAAAAAACT TAACAAAATG ATAGGTGTCA ATATTTTGCT TGGCTCACTA TATGTTGTTG GATGTACAAT ATTTATTTAT TTATTTAAAG AACAGATATT TTCAGTAATA GCCAAAGATA TTAATTATCA AGTTTCTATT TTATCTTTTA TGTTAATTGG CATATATTTC TGTATTCGCG TTTGGTGTGA CACTTATGCA ATGTTATTGC AAAGTATGAA TTATTTAAAA ATACTTTGGA TATTAGTACC ACTACAAGCA ATAATTGGTG GAATAGCACA ATGGTATTTT TCTAGTACGC TTGGAATCAG TGGAGTGCTG CTTGGCTTGA TTATATCTTT TGCTTTAACT GTTTTTTGGG GGCTTCCACT AACTTACTTA ATTAAGGCAA ATAAGGGATA A
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Protein sequence | MLKIPSHLIV AGSSWLSKII IAGVQLASIS YLISILGEEK YAIFSLLTGL LVWCSAVDFG IGTGLQNYIS ECRAKNKSYD AYIKSALHLS FIAIIFFIAL FYIFSGVISA KYLSSFHEVL QDKTRMLFFT SCLVFSSIGI GAIAYKILFA ELVGWKANLL NALSYMIGML GLLYIYYRGI SVDIKLSLIV LYLPVGMISL CYIVYRYIKL YHVKTTKSHY IAILRRSSGF FLFTLLSIVV LQTDYMVISQ RLTPADIVQY TVTMKIFGLV FFIYTAILQA LWPICAELRV KQQWKKLNKM IGVNILLGSL YVVGCTIFIY LFKEQIFSVI AKDINYQVSI LSFMLIGIYF CIRVWCDTYA MLLQSMNYLK ILWILVPLQA IIGGIAQWYF SSTLGISGVL LGLIISFALT VFWGLPLTYL IKANKG
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