12 homologs were found in PanDaTox collection
for query gene Mpop_4883 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_4883  hypothetical protein  100 
 
 
146 aa  292  1e-78  Methylobacterium populi BJ001  Bacteria  normal  0.0939643  normal  0.162313 
 
 
-
 
NC_011757  Mchl_1579  Peptidoglycan-binding domain 1 protein  66.41 
 
 
232 aa  166  1e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.988473 
 
 
-
 
NC_010172  Mext_0353  hypothetical protein  63.36 
 
 
199 aa  154  5.0000000000000005e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.851273  normal 
 
 
-
 
NC_011757  Mchl_0303  Peptidoglycan-binding domain 1 protein  56.25 
 
 
232 aa  133  8e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.220204  normal 
 
 
-
 
NC_011757  Mchl_3834  Peptidoglycan-binding domain 1 protein  53.91 
 
 
233 aa  127  5.0000000000000004e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4383  peptidoglycan binding domain-containing protein  53.44 
 
 
233 aa  125  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.245541  normal 
 
 
-
 
NC_010172  Mext_0448  hypothetical protein  58.23 
 
 
98 aa  87  8e-17  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.983907 
 
 
-
 
NC_011757  Mchl_3332  hypothetical protein  62.32 
 
 
163 aa  62.4  0.000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2232  hypothetical protein  33.87 
 
 
159 aa  60.8  0.000000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3543  hypothetical protein  46.67 
 
 
61 aa  45.4  0.0002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2666  Peptidoglycan-binding domain 1 protein  27.61 
 
 
224 aa  41.6  0.004  Methylobacterium populi BJ001  Bacteria  normal  0.162936  normal  0.560234 
 
 
-
 
NC_007925  RPC_4278  hypothetical protein  33.33 
 
 
227 aa  41.2  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.335635  normal  0.0437903 
 
 
-
 
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