12 homologs were found in PanDaTox collection
for query gene Mpe_A2269 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007298  Daro_3777  putative cox2 cytochrome oxidase subunit 2  65.97 
 
 		 657 aa  874    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000560662  hitchhiker  0.00392281 
 
 
-
 
NC_008825  Mpe_A2269  putative cox2 cytochrome oxidase subunit 2  100 
 
 		 677 aa  1385    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2546  putative cox2 cytochrome oxidase subunit 2  98.52 
 
 		 677 aa  1367    Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00554628  normal  1 
 
 
-
 
NC_008740  Maqu_3222  hypothetical protein  26.92 
 
 		 516 aa  80.9  0.00000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  0.258134  n/a   
 
 
-
 
NC_007348  Reut_B4690  transcriptional regulator LysR  23.67 
 
 		 527 aa  77.4  0.0000000000008  Ralstonia eutropha JMP134  Bacteria  normal  0.989962  n/a   
 
 
-
 
NC_003910  CPS_0807  hypothetical protein  47.06 
 
 		 441 aa  63.2  0.00000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.0416159  n/a   
 
 
-
 
NC_009943  Dole_2689  SH3 type 3 domain-containing protein  44.44 
 
 		 676 aa  58.5  0.0000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0942  putative regulatory protein, LysR  20.41 
 
 		 528 aa  53.9  0.00001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0280337  normal  1 
 
 
-
 
NC_008340  Mlg_2466  putative regulatory protein, LysR  21.72 
 
 		 512 aa  49.3  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.030502  normal  0.578084 
 
 
-
 
NC_009512  Pput_2970  hypothetical protein  55.81 
 
 		 427 aa  46.6  0.001  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2785  hypothetical protein  55.81 
 
 		 427 aa  46.6  0.002  Pseudomonas putida KT2440  Bacteria  normal  0.191276  normal  1 
 
 
-
 
NC_007298  Daro_2392  hypothetical protein  32.63 
 
 		 453 aa  44.7  0.005  Dechloromonas aromatica RCB  Bacteria  normal  0.514356  normal  0.55434 
 
 
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