Gene Dole_2689 details

Gene Information

• Locus tag: Dole_2689
• ID: 5695540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 3234361
• End bp: 3236391
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641265297
• Product: SH3 type 3 domain-containing protein
• Protein accession: YP_001530569
• Protein GI: 158522699

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGCGG ACACCGCAGG CAGGCAGCAG GCCGTTGAGA TTCAATCCAC CGTGCCGGTG 
CTGAATATCA GAAGCCGGCC CGGCCTGAAT GCCGGGGTCG TGGGGAAACT GACCGCTTCG 
GAAACATCAA CGGCCCTGGA AGTTCTGGAA AAGTGGGTCA AAATCCGCAA ATCCGATGGC 
ACGGAAGGGT TTGTGTTCAA AGAATACACC GCCGTCATAC AACCGGAACA GGCGCCTGAA 
GAGGCGTTGA TGCCGGACCC GCCTTCAGAG AAACCCGTGT TGCTCACCGC CACCGTGCCG 
GTGCTGAATA TCAGAAGCCG GCCTGGCCTG AATGCCGATG TCGTGGGGAA ACTGACCGCT 
TCGGAAACAT CGACGGTCCT GGAAGTCCTG GAAGCGTGGG TCAAAATCCG CAAGTCCGAC 
GGCACCGAAG GGTTTGTGTT CAAACAGTAT GCCCGCCTGT CAGAGCGACA CCCGGAAAAA 
CGCTCTGCCG ATCAAAAAAC GAATAAAGGT TCGGATGCCG GCACTTTGCA GGAAGACCGG 
CTGGCCGGCG CGGACACCGA CGGCACCGGT GATCCCGCCC TGGATGATGT GCTTTCAGGG 
TTTGATGATG GCGGGACATC CGCTGATGGC CTGGACGGTG TTCTGGCAGG GTTTGACGGC 
GATGGGGAAA CTTCCGGCGA CCTCGGCGAT GTACTGTCCG GGTTTGAGGA CGAGACATCT 
TCGCTTGAGC TTGACGCCGC GGACACAACC GCCTCTCCCT GGGATGTGGG CGGTTCGGTA 
AAGCTCTCCA CTGTCTTTAA CGTCAACCAT GATCCCCCTG AACCCGGCTG GACCGATCAC 
CGCGGCCTGT CGCGCATGCG ATCGGAACTT GACCTGCAAA TTGATCGGGA TATTTATCAC 
TCCTGGAAGG CTCGCGTCAG CGGCCGGGCG TTCTATGATT TTGCATACGC CATCCAGGGC 
CGTGACAACT ACACCAGCCA GGTGCTGGAC GTGTATGAAG ACGAGGCTGA AATCCGGGAG 
GCCTATGTGC AGGGCTCTCT TTTGCCGTCC CTTGACCTGA AGGTGGGCCG CCAGATAGTG 
GTCTGGGGAC GGTCGGAGAA CTTTCGTGTC ACTGATGTGC TGAATCCCGT TGACAGCCGC 
ACCCCCGGCC TGGTGGATAT CGAAGACATT CGCCTGCCGG TGTGCATGAC CCGGCTGGAT 
TATTACACAG GCGCCTTTTC CATCACCGGC ATTGCCATTC CAGAAATCCG GTTCAACAAA 
ATGCCGGTGG TCGGCAACGA CTTTTATCCC TTAAACGAAG CCCAGCCCGG CGAGGTAGTG 
CCCAGTCCGA GCCTTGCCAA TACAGAACTG GCAATGGCGA TAAAAGGCAT CTTTCACGGG 
TGGGACGCGT CTTTATACGG CGCCTATCTG TTTGATGACG ACACTTACTA TGAACTGCTG 
GGCTATGAAT ACACCCTCGT GGATACCATT CCGCTGCCCG GGGGCGGGAC CCAGCCGGTT 
TATGAACAGG ATATTGTGGC CGTGCGCCGT CATGCCAGGC TGTACATGGT GGGCGGGGCC 
GCCAATGTCA CCACCGGCAG CTGGCTTTTC AAGACGGAGC TCTCCTATAC CGATGGTTAC 
CGGTACACCA GCACGGAGGA TGAAAAAGGG AAGTTGAGGT GGCTGGTCGG CCTGGAGTAT 
TCAGGCCTGA AAAACACTAC TGTTTCCCTG GATCTTTTAC AAACATGGGT GGACGACTTT 
GAGCCGGCCA TGAAAAAGAT GCCGGACTAC GCCGTGGAAA CACAGTTCGA AGCAGCCCTT 
CGGGTCTCCC GGACCTTTCT GCGTGAACGG CTTGAGCTGG TCTTTTTCGG CCTTTTAAGG 
GGCGGCCAGG GAGAAGACGG CGCCTTTGAG CGCCTTTCCG CGTCTTATGA TTTTACCGAC 
CGCCTCACCG GCGGCATCGG CGCCCTCTTC TACCAGGACG GTGACAGCAT CACCTATGAC 
AACATTCACG ACAACAACCG GGTGTACGCG GACTTAACTT ACAATTTTTA A 

 

Protein sequence

MAADTAGRQQ AVEIQSTVPV LNIRSRPGLN AGVVGKLTAS ETSTALEVLE KWVKIRKSDG 
TEGFVFKEYT AVIQPEQAPE EALMPDPPSE KPVLLTATVP VLNIRSRPGL NADVVGKLTA 
SETSTVLEVL EAWVKIRKSD GTEGFVFKQY ARLSERHPEK RSADQKTNKG SDAGTLQEDR 
LAGADTDGTG DPALDDVLSG FDDGGTSADG LDGVLAGFDG DGETSGDLGD VLSGFEDETS 
SLELDAADTT ASPWDVGGSV KLSTVFNVNH DPPEPGWTDH RGLSRMRSEL DLQIDRDIYH 
SWKARVSGRA FYDFAYAIQG RDNYTSQVLD VYEDEAEIRE AYVQGSLLPS LDLKVGRQIV 
VWGRSENFRV TDVLNPVDSR TPGLVDIEDI RLPVCMTRLD YYTGAFSITG IAIPEIRFNK 
MPVVGNDFYP LNEAQPGEVV PSPSLANTEL AMAIKGIFHG WDASLYGAYL FDDDTYYELL 
GYEYTLVDTI PLPGGGTQPV YEQDIVAVRR HARLYMVGGA ANVTTGSWLF KTELSYTDGY 
RYTSTEDEKG KLRWLVGLEY SGLKNTTVSL DLLQTWVDDF EPAMKKMPDY AVETQFEAAL 
RVSRTFLRER LELVFFGLLR GGQGEDGAFE RLSASYDFTD RLTGGIGALF YQDGDSITYD 
NIHDNNRVYA DLTYNF