| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2269 |
|---|
| Symbol | |
|---|
| ID | 4785108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2427030 |
|---|
| End bp | 2429063 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640090837 |
|---|
| Product | putative cox2 cytochrome oxidase subunit 2 |
|---|
| Protein accession | YP_001021460 |
|---|
| Protein GI | 124267456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA GACAAGACAC TGCGCGCCGA AGCGGCGCGA CCCCCCGCGC GGGCCAGTCC
CGCCGCCTCG CGCGCGCGGC GCTGGCCGGC GGCCTGGCCG TGTGCGGCCT GGCCCAGGCG
CAGGACGCCG CCGCGCCGGT CGACCCCTGG AAGGTCGACA TCTACTACGA GAACGACACC
CGCTTCCGGG GCAAGGACGC GACCGGCGAG CGCGTCGGAC TCTCCAAGTT CCGCAACACC
CTGCAGGTCG AGGCCGACAA GAAGCTCGAA GGCGGCTGGA AGTTCCGCAG CATCCTGCGC
GGCAGCTTCG ACGGCGTCTA CCGCATGAAC GACGACCAGT ACGGCCGCAA GGCCGGCGGC
GGCGTGCTGC TCGAGTCCCA GGGCGGACCG CCCCCGGTGC CCCACGGCAG CGGCATCGTC
AACAAGGGCC TGGTCGACGG CCTCGGGCTG GTCAACAACG TCTTCGGCTT CAACTCCACC
AACCCCGCCG CGCCCAACTA CAACCCCAAC GAAGGCCTGC GCCTGCTCGG TGACCGCTGG
CACGACTCGC TCAACGGCGG GGTGGAGTTC GCCACCCCCG TGCGCCCCTG CGACACCGAC
CGGCGCGGCT GCGCCGACTT CGGCGGCTAC GGCGACAAGA AGCGCAGCGA GCTCGAACTG
CCCGAGTTCA ACGAACGCTG GGACGTCATC CGCGAAGCCT TCGTCACCAA CACCGTCGGC
CTGGCCGACG GCAAGCAGCT CTTCCTCAAG CTGGGCAAGC AGCAGGTGGT GTGGGGCCGC
ACCGACCTGT TCCGCGTGCT CGACGTGATC AACCCGGTCG ACTACTCGCG CAACAACATC
TACGACGAAC TCCAGGACAT CCGCATCCCC ATGTGGATCG CCCAGGCCGA GTACCGCATG
GGCCCGAGCG AGAGCATGCA GGACCGCAAC CTGCAGCTGG TGTGGAACTT CGACAAGTTC
CGCCCCAACA ACCTCGGCCA GTGCGGCACC GCCAACGTCA TCCTCGACGC CGGCTGCTTC
TTCCGCGGCA TGAAGAACCT GTGGGACAAC GGCGGCACGG TGGCCAACTT CGCCAACGTC
GGCCCCGGCG TGCTGCTCGC CACCGACTTC GGCCCCGGCC AGATCGGCCT GCGCGACGTG
AAGCTGCCCA ACTGGAGCTT GAAGAACACC CAGCTCGGGC TGAAGTACGA GGGCGTGAGC
CAGGACGGCC TGTCGTTCTC GCTCAACGCC TTGACCTACC GCTCGCAGCT GCCCTCGCTG
CGCGGCGGCA AGGGCGCGAC CAACGCCTTC ACCGGCGAGA CGCGCACCGA CGCGCAGGGC
GGCTGGCCCT ACCTGATCGC CTTCGACATG CACTTCCCGC GCGTGAACCT CATCGGCGGC
TCGATGGACT TCGAGTGGCA GGCGGCCAAG GCGGCGGTGC GGGTCGAGGC GGCCTTCACC
AACGGCGAGG AGTTCGCCAA CACCCTCAAG CCCCAGCTGT ACTCGAAGAA CAAGGTGTTC
CGCTCGGTGG TCGGCTTCGA CCGGCCCACC TTCGTGCCCT TCATCAACCC CAACCGCACC
ACGCTGTTCT CCGCGCAGCT GTTCTACCAG CACATCTTCG ACCACGAGTA CGAGCGCGGC
CAGTTCGGCC CGGTGGGCAT GCCCGACTGG GAGAACAACG TGATCGCCAC GCTGCTGATG
AAGGCCTTCC TCGTCAACGA CCGCGTCAGC CCGCAGCTGA TCACGGCCTA CGACGTGCAG
GCCCGCGCGC TGGTCACCTC CCCGCAGGTC GACTGGATCG TCACCGACAA GTTCAAGATC
AGCTTCGGGG GCAACTTCAA GCTGCGCAAC GGCGAGGACC GCTGGAAGTT CGACGACTGC
CGCTCGTGCA ACCCGTGGGG GCCGTTCACC GCGCCCTTCG GTGACGCCGA CCCCACCACC
CCCTACTCGC GCGGCTTCGG CGGCTTCGAG CCCCTCGGGC GCTTCCGCGC CGGCCCCATC
GGCGCCGCAT GGAAGGAGAA CGAGATCTTC CTCACCGCGC GGTATCAGTT CTGA
|
|---|
| Protein sequence | MKNRQDTARR SGATPRAGQS RRLARAALAG GLAVCGLAQA QDAAAPVDPW KVDIYYENDT
RFRGKDATGE RVGLSKFRNT LQVEADKKLE GGWKFRSILR GSFDGVYRMN DDQYGRKAGG
GVLLESQGGP PPVPHGSGIV NKGLVDGLGL VNNVFGFNST NPAAPNYNPN EGLRLLGDRW
HDSLNGGVEF ATPVRPCDTD RRGCADFGGY GDKKRSELEL PEFNERWDVI REAFVTNTVG
LADGKQLFLK LGKQQVVWGR TDLFRVLDVI NPVDYSRNNI YDELQDIRIP MWIAQAEYRM
GPSESMQDRN LQLVWNFDKF RPNNLGQCGT ANVILDAGCF FRGMKNLWDN GGTVANFANV
GPGVLLATDF GPGQIGLRDV KLPNWSLKNT QLGLKYEGVS QDGLSFSLNA LTYRSQLPSL
RGGKGATNAF TGETRTDAQG GWPYLIAFDM HFPRVNLIGG SMDFEWQAAK AAVRVEAAFT
NGEEFANTLK PQLYSKNKVF RSVVGFDRPT FVPFINPNRT TLFSAQLFYQ HIFDHEYERG
QFGPVGMPDW ENNVIATLLM KAFLVNDRVS PQLITAYDVQ ARALVTSPQV DWIVTDKFKI
SFGGNFKLRN GEDRWKFDDC RSCNPWGPFT APFGDADPTT PYSRGFGGFE PLGRFRAGPI
GAAWKENEIF LTARYQF
|
|---|
| |