11 homologs were found in PanDaTox collection
for query gene Mext_3883 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_3883  putative site-specific integrase/recombinase  100 
 
 		 66 aa  132  1.9999999999999998e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.353137  normal  0.0700878 
 
 
-
 
NC_010511  M446_1177  integrase family protein  88.52 
 
 		 383 aa  110  6e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.28411  normal  1 
 
 
-
 
NC_011757  Mchl_4252  integrase family protein  80.3 
 
 		 132 aa  108  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.354411 
 
 
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NC_011894  Mnod_6293  integrase family protein  66.67 
 
 		 344 aa  71.6  0.000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_010511  M446_3879  integrase family protein  59.62 
 
 		 349 aa  52.8  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3294  phage integrase family protein  56 
 
 		 360 aa  52  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.550021  normal  1 
 
 
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NC_007494  RSP_3623  putative integrase  56 
 
 		 373 aa  50.4  0.000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.238631  n/a   
 
 
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NC_009050  Rsph17029_3344  phage integrase family protein  56 
 
 		 360 aa  50.4  0.000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.563509  normal  0.0469601 
 
 
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NC_011989  Avi_0886  phage-related integrase  51.85 
 
 		 349 aa  48.9  0.00002  Agrobacterium vitis S4  Bacteria  normal  0.280114  n/a   
 
 
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NC_004310  BR0966  phage integrase family site specific recombinase  48.98 
 
 		 341 aa  43.5  0.001  Brucella suis 1330  Bacteria  normal  0.832131  n/a   
 
 
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NC_007643  Rru_A1741  Phage integrase  53.49 
 
 		 278 aa  42.4  0.002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
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