10 homologs were found in PanDaTox collection
for query gene Mchl_4252 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_4252  integrase family protein  100 
 
 		 132 aa  273  4e-73  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.354411 
 
 
-
 
NC_010511  M446_1177  integrase family protein  71.97 
 
 		 383 aa  184  3e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.28411  normal  1 
 
 
-
 
NC_010172  Mext_3883  putative site-specific integrase/recombinase  80.3 
 
 		 66 aa  108  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.353137  normal  0.0700878 
 
 
-
 
NC_011894  Mnod_6293  integrase family protein  38.54 
 
 		 344 aa  57.8  0.00000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3879  integrase family protein  53.85 
 
 		 349 aa  48.9  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3294  phage integrase family protein  53.19 
 
 		 360 aa  46.6  0.0001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.550021  normal  1 
 
 
-
 
NC_007494  RSP_3623  putative integrase  53.19 
 
 		 373 aa  45.8  0.0002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.238631  n/a   
 
 
-
 
NC_009050  Rsph17029_3344  phage integrase family protein  53.19 
 
 		 360 aa  45.8  0.0002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.563509  normal  0.0469601 
 
 
-
 
NC_011989  Avi_0886  phage-related integrase  42.86 
 
 		 349 aa  46.2  0.0002  Agrobacterium vitis S4  Bacteria  normal  0.280114  n/a   
 
 
-
 
NC_007643  Rru_A1741  Phage integrase  44.9 
 
 		 278 aa  41.6  0.004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>