32 homologs were found in PanDaTox collection
for query gene Mext_1825 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_1825  formylmethanofuran--tetrahydromethanopterin formyltransferase  100 
 
 
311 aa  628  1e-179  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2160  formylmethanofuran--tetrahydromethanopterin formyltransferase  100 
 
 
311 aa  628  1e-179  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.367443  normal  0.0914305 
 
 
-
 
NC_010725  Mpop_1776  formylmethanofuran--tetrahydromethanopterin formyltransferase  95.82 
 
 
311 aa  603  9.999999999999999e-173  Methylobacterium populi BJ001  Bacteria  normal  0.834938  normal 
 
 
-
 
NC_010505  Mrad2831_0524  formylmethanofuran--tetrahydromethanopterin formyltransferase  90.26 
 
 
315 aa  566  1e-160  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.197066  normal  0.878491 
 
 
-
 
NC_010511  M446_5774  formylmethanofuran--tetrahydromethanopterin formyltransferase  74.92 
 
 
310 aa  453  1.0000000000000001e-126  Methylobacterium sp. 4-46  Bacteria  normal  0.27994  normal 
 
 
-
 
NC_011894  Mnod_5998  formylmethanofuran--tetrahydromethanopterin formyltransferase  74.68 
 
 
311 aa  453  1.0000000000000001e-126  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.16132  n/a   
 
 
-
 
NC_011666  Msil_2402  formylmethanofuran--tetrahydromethanopterin formyltransferase  55.23 
 
 
302 aa  337  9.999999999999999e-92  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA2858  formylmethanofuran--tetrahydromethanopterin formyltransferase  53.49 
 
 
298 aa  321  9.000000000000001e-87  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0626869  n/a   
 
 
-
 
NC_007947  Mfla_1664  formylmethanofuran--tetrahydromethanopterin formyltransferase  52.46 
 
 
302 aa  319  3.9999999999999996e-86  Methylobacillus flagellatus KT  Bacteria  normal  0.532939  normal  0.944433 
 
 
-
 
NC_009720  Xaut_1794  formylmethanofuran--tetrahydromethanopterin formyltransferase  56.81 
 
 
313 aa  317  1e-85  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0427197  normal  0.884171 
 
 
-
 
NC_010625  Bphy_5933  formylmethanofuran--tetrahydromethanopterin formyltransferase  52.77 
 
 
324 aa  305  6e-82  Burkholderia phymatum STM815  Bacteria  normal  0.62343  normal  0.0496901 
 
 
-
 
NC_007952  Bxe_B2463  formylmethanofuran--tetrahydromethanopterin formyltransferase  51.94 
 
 
319 aa  295  6e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.108855 
 
 
-
 
NC_007484  Noc_0023  formylmethanofuran--tetrahydromethanopterin formyltransferase  51.59 
 
 
285 aa  289  5.0000000000000004e-77  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.701164  n/a   
 
 
-
 
NC_014148  Plim_0767  formylmethanofuran/tetrahydromethanopterin N- formyltransferase  52.79 
 
 
343 aa  285  7e-76  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6506  formylmethanofuran--tetrahydromethanopterin formyltransferase  51.16 
 
 
319 aa  283  3.0000000000000004e-75  Burkholderia phymatum STM815  Bacteria  normal  0.764431  normal  0.0206258 
 
 
-
 
NC_012791  Vapar_3065  formylmethanofuran--tetrahydromethanopterin formyltransferase  50.63 
 
 
317 aa  281  9e-75  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2625  formylmethanofuran--tetrahydromethanopterin formyltransferase  52.32 
 
 
307 aa  280  2e-74  Methylibium petroleiphilum PM1  Bacteria  normal  0.325876  normal 
 
 
-
 
NC_010524  Lcho_3134  formylmethanofuran--tetrahydromethanopterin formyltransferase  50.98 
 
 
315 aa  258  7e-68  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007955  Mbur_1728  formylmethanofuran--tetrahydromethanopterin formyltransferase  45.07 
 
 
297 aa  242  7e-63  Methanococcoides burtonii DSM 6242  Archaea  normal  0.822963  n/a   
 
 
-
 
NC_008553  Mthe_1643  formylmethanofuran--tetrahydromethanopterin formyltransferase  43.23 
 
 
296 aa  238  1e-61  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_0215  formylmethanofuran--tetrahydromethanopterin formyltransferase  44.19 
 
 
300 aa  237  2e-61  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_2244  formylmethanofuran--tetrahydromethanopterin formyltransferase  43.89 
 
 
295 aa  236  3e-61  Methanosphaerula palustris E1-9c  Archaea  hitchhiker  0.00428201  normal  0.0387564 
 
 
-
 
NC_007355  Mbar_A0980  formylmethanofuran--tetrahydromethanopterin formyltransferase  39.8 
 
 
297 aa  231  1e-59  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_0224  formylmethanofuran--tetrahydromethanopterin formyltransferase  41.56 
 
 
301 aa  221  1.9999999999999999e-56  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_0628  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.21 
 
 
302 aa  219  3.9999999999999997e-56  Methanoculleus marisnigri JR1  Archaea  normal  0.371181  n/a   
 
 
-
 
NC_009975  MmarC6_1060  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.67 
 
 
302 aa  216  2.9999999999999998e-55  Methanococcus maripaludis C6  Archaea  normal  0.933214  n/a   
 
 
-
 
NC_009712  Mboo_0593  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.57 
 
 
294 aa  208  1e-52  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.662951  normal  0.168684 
 
 
-
 
NC_009135  MmarC5_1799  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.35 
 
 
302 aa  208  1e-52  Methanococcus maripaludis C5  Archaea  normal  0.349721  n/a   
 
 
-
 
NC_009634  Mevan_0919  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.02 
 
 
302 aa  207  3e-52  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0857  formylmethanofuran--tetrahydromethanopterin formyltransferase  42.67 
 
 
302 aa  203  3e-51  Methanococcus maripaludis C7  Archaea  normal  0.611816  hitchhiker  0.0019053 
 
 
-
 
NC_007796  Mhun_1808  formylmethanofuran--tetrahydromethanopterin formyltransferase  37.66 
 
 
295 aa  195  7e-49  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0993  formylmethanofuran--tetrahydromethanopterin formyltransferase  40.13 
 
 
302 aa  170  3e-41  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.945463  normal  0.149431 
 
 
-
 
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