Gene Lcho_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3134 
Symbol 
ID6161067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3460748 
End bp3461695 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID641665909 
Productformylmethanofuran--tetrahydromethanopterin formyltransferase 
Protein accessionYP_001792159 
Protein GI171059810 
COG category[C] Energy production and conversion 
COG ID[COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase 
TIGRFAM ID[TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCACGACAAC AACGCCGCTC GAACTCAACG GCGTGGTGAT CGACGACGGC 
TTTGCCGAAG CCTTCCCGAT GAAGGCGACG CGGCTGATCA TCACCGCCCA CAACCCGACC 
TGGGCCCGCC ACGCCGCGGT GGCCGCCACC GGCTTCGCCA CCTCGGTGAT CGCCTGCGGC 
TGCGAGGCCG GCATCGAACG CGAACTGCCG CCCGACGAGA CGCCCGACGG CCGGCCCGGC 
ATCGCGATCC TGATCTTCTC GATGAGCGGC AAGGAGCTGG CCAAGCAGAT CGAGCGGCGG 
GTCGGCCAGT GCGTGCTGAC CTGCCCGACC ACCGCCGTCT TCTCCGGCAT TGCCGAAGGT 
GAAGCCGTGC CGCTGGGCAA GAACCTGCGC TTCTTCGGCG ACGGCTGGCA GACCTCCAAG 
CTCATCGCCG GCCAGCGCTA CTGGCGCGTG CCGGTGATGG ACGGCGAGTT CGTCGCGCAG 
GAAACCACCG CGGTCATCAA GGGCGTGGGC GGCGGCAACC TGCTGCTGCT GGCGCGCGAT 
ACCGACGCCG CGCTGGCCGC GGCCGAGGCC GCCGTGGTGG CGATGCAGCG CCTGCGCGAC 
GTCATCATGC CGTTCCCCGG CGGCGTGGTG CGCTCGGGCT CGAAGGTGGG CAGCAAGTAC 
CCGAGCCTGA TGGCGTCGAC CAACGACGCC TTCTGCCCCG GCCTGCTCGG CCTGGTCAAA 
CACAGCGAAC TGGACGCGCG CACCCGCTGC GTGATGGAGA TCGTGATCGA CGGCCTGAGC 
GAAGCCGCGG TGGGCGAGGC GATGCGCGTA GGCATGCAGG CCGGCATCGC GCTGGGTGCG 
GCCGGTGGCC TGCTGCGCAT CTCGGCGGGC AACTACGGCG GCAAGCTCGG GCCTTATCAC 
TTCCACCTGC ACAAGCTGCT GGGCGAGCAG GCGAGGGCCG CGACATGA
 
Protein sequence
MSAATTTTPL ELNGVVIDDG FAEAFPMKAT RLIITAHNPT WARHAAVAAT GFATSVIACG 
CEAGIERELP PDETPDGRPG IAILIFSMSG KELAKQIERR VGQCVLTCPT TAVFSGIAEG 
EAVPLGKNLR FFGDGWQTSK LIAGQRYWRV PVMDGEFVAQ ETTAVIKGVG GGNLLLLARD 
TDAALAAAEA AVVAMQRLRD VIMPFPGGVV RSGSKVGSKY PSLMASTNDA FCPGLLGLVK 
HSELDARTRC VMEIVIDGLS EAAVGEAMRV GMQAGIALGA AGGLLRISAG NYGGKLGPYH 
FHLHKLLGEQ ARAAT