Gene Mpal_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_2244 
Symbol 
ID7272541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp2393188 
End bp2394075 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID643570856 
Productformylmethanofuran--tetrahydromethanopterin formyltransferase 
Protein accessionYP_002467260 
Protein GI219852828 
COG category[C] Energy production and conversion 
COG ID[COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase 
TIGRFAM ID[TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00428201 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0387564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTA ATGGAGTACC AATCGATGAC ACCTATGCCG AGGCTTTCCC AATCTGGATC 
TCGCGGGTGC TCATCACTGC TGCGACGATG GACCTCGCCT ACACCGCTGC TGTTGAGGCA
AGCGGGTTCG CAACATCATG TATAGGATGT ACTGCTGAGT GCGGTGTCGA CACCTTCGTC
CCCGCCGAGG AGACACCTGA TGGAAGACCT GGTTACTCGA TGCTGATCTG CAACCCATCC
AAGAAGAAAC TGAAAGAACA GTTGATCGAG CGAATCGGCG AGTGCATCCT GACCGCTCCG
ACCACAGCAG CCTTTAACGG TCTGCCGGGC GCTGAGGAGA AGATCCCAGT GAAGCTCCAC
TTCTTCGGAG ATGGCTATGA ATACCAGCAG AAGGTCGGAG ACCGGGACTG CTGGGCCATC
CCGCTGATGG GTGGCGAGTT CATCATCGAG GAGGAGTACG GTGCAGTCAA GGGAGTCGCA
GGCGGTAACT TCTTTGTGAT GGGCGAGAAC CAGATGGCTG CACTGGTCGG GGCCCAGGCC
GCCAGCGATG CGATCAGCGG CGTCGAGGGT GCCATCACGT CATTCCCAGG TGGTATCGTT
GCGAGTGGCT CGAAGGTCGG CTCGAAGAAG TACAAGTTCA TGAATGCCTC GACCAACGAG
GCCTACTGCC CGTCCCTGAA GGGAAAGGTC GAGGACTCTA AGATCCCTGA CGGCGTGAAC
TCGGTCTTTG AGATCGTCAT AGATGGTGTC GACGCCGAGA CCGTCGCCGA TGCAATGGGG
GCGGGGATCA GAGCGGCATG CATGATCCCT GGCGTGAAGT TCATCAGCGC AGGGAACTAC
GGCGGCAGCC TCGGCCCGCA CCAGTTCCAG TTAAAGGACC TCTTCTGA
 
Protein sequence
MEFNGVPIDD TYAEAFPIWI SRVLITAATM DLAYTAAVEA SGFATSCIGC TAECGVDTFV 
PAEETPDGRP GYSMLICNPS KKKLKEQLIE RIGECILTAP TTAAFNGLPG AEEKIPVKLH
FFGDGYEYQQ KVGDRDCWAI PLMGGEFIIE EEYGAVKGVA GGNFFVMGEN QMAALVGAQA
ASDAISGVEG AITSFPGGIV ASGSKVGSKK YKFMNASTNE AYCPSLKGKV EDSKIPDGVN
SVFEIVIDGV DAETVADAMG AGIRAACMIP GVKFISAGNY GGSLGPHQFQ LKDLF