Gene Mbar_A0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0980 
Symbol 
ID3625752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1197154 
End bp1198047 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content46% 
IMG OID637699873 
Productformylmethanofuran--tetrahydromethanopterin formyltransferase 
Protein accessionYP_304532 
Protein GI73668517 
COG category[C] Energy production and conversion 
COG ID[COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase 
TIGRFAM ID[TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA ACGGAGTAGA AATCGAAGAT ACATATGCAG AAGCGTTTCC GATCAAGATT 
GCACGGGTAC TCATAACAGC TGCTACTAAG CGCTGGGCCC TTGTGGCAGC TACTGAAGCT
ACAGGCTTTG CAACATCCGT TATAATGTGT CCTGCCGAAG CCGGAATTGA GAGGTTAGCA
AGCCCCAGCG AGACTCCTGA TGGCAGACCT GGAGTTTATG TCCAGATATG CACTTTCAAA
TACGAAGCTC TTGAAGAACA GCTCCTTGAA AGAATTGGAC AGTGTGTACT TACAGCCCCT
ACAACTGCAG TCTTCAATGG ACTTCCTGAA GCCGAAAAAC AATTTAATGT AGGTTTTAAA
CTCAAGTTCT TCGCAGACGG CATGGAATCC GAAACCCAGA TTGCAGGCCG CAAAGTATAT
AAGGTACCAA TTATGGAAGG AGACTTCCTG GCCGAAGAAA ATATAGGAGC CATAGCTGGA
ATTGCAGGCG GAAACTTCTT CATCTTCGGA GACTCCCAGA TGACCGCCCT GACTGCGGCC
GAAGCTGCTG TTGATACCAT TGCAGAGCTT GAAGGTACAA TTACCCCCTT CCCTGGCGGT
ATTGTAGCCA GCGGATCTAA ATCCGGAGCA AACAAATACA AGTTCCTGAA AGCTACTGCT
AACGAAAGAT TCTGTCCTTC CATAAAGGAT AAGATTGAAA ATACTGAAAT CCCGGCAGAT
GTCAATGCTG TTTATGAAAT TGTTATCAAC GGGCTTGATG AAGAAAGCAT AAAAGCTGCC
ATGAAAGCAG GAATTAAAGC CGCTGTAACT GTTCCGGGCG TTAAGAAGAT CTCAGCAGGA
AACTACGGCG GAAAACTGGG CAAATATCAG TTTAAACTTC ACGAACTCTT CTGA
 
Protein sequence
MEINGVEIED TYAEAFPIKI ARVLITAATK RWALVAATEA TGFATSVIMC PAEAGIERLA 
SPSETPDGRP GVYVQICTFK YEALEEQLLE RIGQCVLTAP TTAVFNGLPE AEKQFNVGFK
LKFFADGMES ETQIAGRKVY KVPIMEGDFL AEENIGAIAG IAGGNFFIFG DSQMTALTAA
EAAVDTIAEL EGTITPFPGG IVASGSKSGA NKYKFLKATA NERFCPSIKD KIENTEIPAD
VNAVYEIVIN GLDEESIKAA MKAGIKAAVT VPGVKKISAG NYGGKLGKYQ FKLHELF