Gene Mlab_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0215 
Symbol 
ID4795682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp204545 
End bp205447 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content52% 
IMG OID640098861 
Productformylmethanofuran--tetrahydromethanopterin formyltransferase 
Protein accessionYP_001029658 
Protein GI124485042 
COG category[C] Energy production and conversion 
COG ID[COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase 
TIGRFAM ID[TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATT CATATAATAT GGAATTCAAC GGTGTAATTC TTGAAGACAC ATATGCAGAA 
GGCTTCCCGG TGTGGGCTGC CCGTGTAATC ATCACTGCAG TAACGAAAGA GTGGGCATAC
AAAGCAGCAA CCGAAGCAAC CGGTTTTGCA ACCTCAACCA TCGGCTGCCC CTGCGAAGCA
GGAATCGAAC GGTTCGTTCC GGCATCGGAA ACCCCCGACA ACCGCCCGGG ATATGCAATC
ATGCTCTGCT GTGGTAAGAA GGCACTTAAA GAGCAGGTTC TTGAGCGCAT TGCCGAGTGT
GTTTTAACTG CACCCACAAC CGCCGTTTTC AATGGAAAAG CAGGCTCTGA AGAGATCATC
CCGGTAAAAC TCCACTTCTT CGGCGATGGA TACGAATCCA AAGTCGTCGT TGGCGGAATC
AACTGCTGGT CCATCCCAAT CATGGGCGGC AACTTTGTTG TAGAAGAAGA AGTCGGAGCA
ATTAAAGGCG TTGCCGGCGG TAACTTCCTG ATTATGGGAG ACTCTCAGAT GTCAGCACTC
ATCGCAGCAG AAGCAGCAGT CGATGCAATC AGCTGTGTTC CCGGAACCAT CACCCCGTTC
CCCGGCGGAG TTGTATCCTC AGGATCCAAA GTCGGTTCCC TGAAATACAA ATTCATGGGT
GCATCCACCA ACGAAAAGTT CTGCCCCACG ATCCGCGAGA AGGTCCCGGA AACCGAGATC
CCCGAAGGCG TCAAGGCAGT TTACGAGATC GTCATCGACG GTGTCTCCGA AGCAGCAGTC
AAGGAGGCTA TGAAAGTCGG TGTTCAGGCA GCATGCAGAG TTCCAGGTGT CGTAAAGATC
ACCGCAGGAA ACTACGGCGG AAACCTCGGT CCCTTCAAGT TCCACTTGAA GGACTGCATC
TAA
 
Protein sequence
MPNSYNMEFN GVILEDTYAE GFPVWAARVI ITAVTKEWAY KAATEATGFA TSTIGCPCEA 
GIERFVPASE TPDNRPGYAI MLCCGKKALK EQVLERIAEC VLTAPTTAVF NGKAGSEEII
PVKLHFFGDG YESKVVVGGI NCWSIPIMGG NFVVEEEVGA IKGVAGGNFL IMGDSQMSAL
IAAEAAVDAI SCVPGTITPF PGGVVSSGSK VGSLKYKFMG ASTNEKFCPT IREKVPETEI
PEGVKAVYEI VIDGVSEAAV KEAMKVGVQA ACRVPGVVKI TAGNYGGNLG PFKFHLKDCI