| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3065 |
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| Symbol | |
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| ID | 7973785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3221767 |
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| End bp | 3222720 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793649 |
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| Product | formylmethanofuran--tetrahydromethanopterin formyltransferase |
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| Protein accession | YP_002944950 |
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| Protein GI | 239816040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase |
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| TIGRFAM ID | [TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGCCC TGGAGCGCAA CGGCGTCGTC ATCGACGAAA CTTTTGCCGA GGCCTTTCCG
ATGAAGGCCA CGCGCATCCT CGTCACGGCG CACAACATGG CGTGGGCGCG CCATGCGGCG
GTGTCGGCCA CCGGCTTCGC GACCTCGGTG ATCGCCTGCG GCTGCGAGGC CGGCATCGAG
CGCGAGATCT TGCCGGACGA ATCGCCCGAT GGCCGGCCCG GCGTGAGCGT GCTGATCTTC
TCGATGTCGG GCAAGGAGCT CGGCAAGCAG CTTGAGCGCC GCGTCGGCCA GTGCGTGCTG
ACCTGTCCGA CCACCGCGGT GTTCGCGGGC CTGCCGCGCG GCGCACCAGG CAGCGACGTG
GCCGCGCTCG GCAAGAACCT GCGCTTCTTC GGCGATGGCT GGCAGATCTC GAAGGTGATC
GACGGCGTGC GCTACTGGCG CGTGCCGGTG ATGGACGGCG AATTCGTCGC GGAGGAAGAC
ACGCCCGTGG TGAAGGCCGT GGGCGGCGGC AACCTGCTGC TGCTGGCGCG CGATACCGAT
GCCGCGCTGG CCGCCGCCGA GGCCGCCGTG GCGGCAATGA AGCGGCTGCC CAACGTGGTG
ATGCCGTTCC CGGGCGGCGT GGTGCGCTCG GGCTCGAAGG TCGGCAGCCG CTATGCGAAC
CTCAACGCCT CGACCAACGA TGCCTTCTGC CCGAGCCTCG TCGGGCTGGT GGCGCACAGC
GAACTGGCGG GCGGAACTTC CGCACAGGAG ATCGGCTGCG TGATGGAGAT CGTGATCGAC
GGCCTGACCG AGGCCGACGT GGGCGCCGCC ATGCGCGTGG GCATGGAAGC GGCCATTGCC
ATCGGCCCGG CGGGCGGCCT GCTGCGCATT TCGGCCGGCA ACTACGGCGG CAAGCTGGGG
CCGTTCCATT TCCACCTGCA CAAGCTGCTG GGCGCGGCGG GAGACGCGCC ATGA
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| Protein sequence | MKALERNGVV IDETFAEAFP MKATRILVTA HNMAWARHAA VSATGFATSV IACGCEAGIE
REILPDESPD GRPGVSVLIF SMSGKELGKQ LERRVGQCVL TCPTTAVFAG LPRGAPGSDV
AALGKNLRFF GDGWQISKVI DGVRYWRVPV MDGEFVAEED TPVVKAVGGG NLLLLARDTD
AALAAAEAAV AAMKRLPNVV MPFPGGVVRS GSKVGSRYAN LNASTNDAFC PSLVGLVAHS
ELAGGTSAQE IGCVMEIVID GLTEADVGAA MRVGMEAAIA IGPAGGLLRI SAGNYGGKLG
PFHFHLHKLL GAAGDAP
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