Gene Mboo_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0593 
Symbol 
ID5411701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp562418 
End bp563302 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID640867812 
Productformylmethanofuran--tetrahydromethanopterin formyltransferase 
Protein accessionYP_001403754 
Protein GI154150136 
COG category[C] Energy production and conversion 
COG ID[COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase 
TIGRFAM ID[TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.662951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.168684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA ACGGCGTAAC AATTGACGAT ACCTATGCGG AGGCATTCCC CACCTGGGTC 
TGCCGGGTGA TCATCACCGC AGTGACAAAG GACTGGGCTC TTAAGGCGGC AACAGAAGCA
ACCGGGTTTG CGACATCTGC GATTGGCTGC CCGTGCGAAG CCGGCATCGA AAGCATCCTT
TCCGGCAGTG AGACCCCCGA TGGAAGGCCG GGCGTTTCGA TCCTTATCTG CGCAAGCAAG
AAAAAACTCA AGGAACAGGT TGTTGAACGC CTTGCCGAGT GCGTCCTGAC GGCCCCCACG
ACCGCAGTCT TTAACGGCAT CACCGACGCT GAGGAAAAAA TCCCGGTCAA GCTGCATTTC
TTTGGTGACG GGTATGAGTA CCAGAAAGAA GTAGGCGGAA GGAAATGCTG GGTTATCCCG
ATCATGAACG GCGAATATGT CGGTGAAGAG GAATTCGGCA TCGTGAAAGG CGTTGCCGGT
GGCAACTTCT TTATCATGGG CGAGAACCAG ATGGCCGCCC TTGTGGCAGC CGAGGCCGCC
GTAGATGCAA TTGATGAGGT CAAAGGAGTT ATCACCAGTT TCCCCGGTGG GATCGTGGCG
AGCGGCTCCA AGGTAGGCAG CCTGAAGTAC AAGTTCATGC CCGCATCAAC AAACGAGAAG
TACTGCCCCA CGCTCCGTGA GAAAGTGGCA GATACCAAGA TCCCGGCAGG TGTCAAAGCT
GTATACGAGA TTGTGATCGA TGGCGTTGAC GAAAAGAGTG TTGCCGCGGC GATGGGTGCC
GGTGTCAGGG CAGCAGTCAA GGTGCCGGGA GTGAAGTTTA TCTCGGCCGG CAACTTCGGC
GGGAGCCTTG GGCCGTTCAA GATCGAGCTT TTCAAGGTTA TTTAA
 
Protein sequence
MEINGVTIDD TYAEAFPTWV CRVIITAVTK DWALKAATEA TGFATSAIGC PCEAGIESIL 
SGSETPDGRP GVSILICASK KKLKEQVVER LAECVLTAPT TAVFNGITDA EEKIPVKLHF
FGDGYEYQKE VGGRKCWVIP IMNGEYVGEE EFGIVKGVAG GNFFIMGENQ MAALVAAEAA
VDAIDEVKGV ITSFPGGIVA SGSKVGSLKY KFMPASTNEK YCPTLREKVA DTKIPAGVKA
VYEIVIDGVD EKSVAAAMGA GVRAAVKVPG VKFISAGNFG GSLGPFKIEL FKVI