| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0993 |
|---|
| Symbol | |
|---|
| ID | 5411670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 972617 |
|---|
| End bp | 973525 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640868219 |
|---|
| Product | formylmethanofuran--tetrahydromethanopterin formyltransferase |
|---|
| Protein accession | YP_001404154 |
|---|
| Protein GI | 154150536 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2037] Formylmethanofuran:tetrahydromethanopterin formyltransferase |
|---|
| TIGRFAM ID | [TIGR03119] formylmethanofuran--tetrahydromethanopterin N-formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.945463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.149431 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGTG AGCGGACCAT GGAGATCGGC GGGGCCGTTA TCCTTGACAC CTTTGCCGAG
GCATTCCCGG TCTGGATTTC AAGGGTCCTT GTGACCGCGG ACACTCCCGG GTGGGCGCTT
GCTGCCGCCG CCGAGGCAAC GGGGTTTGCA ACATCGAAGA TCGCCTGCCC CTGTGAGGCC
GGAATCGAGC GGCCCCTTGC CCGGGGCGAG ACCCCGGACA AGCGGCCCGG ATACTCAATC
CTGATCTGTA CCGAGAAGAA GGAGATGAAG GCGCAGGTTG CCGCACGGGT CAGCCAGTGC
ATCCTTCCGG CCCCGACCGC GTCCGCATTC GACGGGCTTC CCGCTGCAAA GGACCGGTTC
TACACCCGGA TGCATTACTT TGGCGACACC TACGAAGAGC GATGTGTGGT CGGCGGCCGG
CAGTGCTGGA AGATCCCGGT GATGGAAGGC TGGTACACCG GCGAGGAGCG CTTCGGGCTT
ATGAAAGGGA TTGCCGGCGG GAACTTCCTT GTCATGGCAG AGGACCGGGC TGCGGCACTT
TCCGGGGCAG AGGCGGCGAT GGCAAAGGTC GCCGGCACGC CCGGGATAAT CGCAAGTTTT
CCCGGAGGGA TTGTCGGGAG TGGATCGAAA GTCGGGTGTA AGAATTACCG GTTCCCGATG
CCGGCAAGCA CGAACCACCG CTGGTGCCCG GCGCTTAAAA ATAAAATTCC GGACTCGCTT
GTCCCTGACG GCGTGGGCGC GGTATACGAG ATCGTGATCA ACGGCTTTGA TGAGGCCGCA
ATTGCCGGGG CAATGCGTGA GGGAATCCGG GCTGCCGCGG CAACCGGAAA GGTCAGCTGC
ATTGGTGCCT CGAACTTTGA GGGAAAACTC GGGCAGACCC GGATAAACCT TCACGCACTT
TTCTCCTGA
|
|---|
| Protein sequence | MGGERTMEIG GAVILDTFAE AFPVWISRVL VTADTPGWAL AAAAEATGFA TSKIACPCEA
GIERPLARGE TPDKRPGYSI LICTEKKEMK AQVAARVSQC ILPAPTASAF DGLPAAKDRF
YTRMHYFGDT YEERCVVGGR QCWKIPVMEG WYTGEERFGL MKGIAGGNFL VMAEDRAAAL
SGAEAAMAKV AGTPGIIASF PGGIVGSGSK VGCKNYRFPM PASTNHRWCP ALKNKIPDSL
VPDGVGAVYE IVINGFDEAA IAGAMREGIR AAAATGKVSC IGASNFEGKL GQTRINLHAL
FS
|
|---|
| |